Gene YpAngola_B0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_B0059 
SymbolyscH 
ID5798229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010157 
Strand
Start bp39274 
End bp39771 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content43% 
IMG OID641337870 
Producttype III secretion protein YopR 
Protein accessionYP_001604490 
Protein GI162417765 
COG category 
COG ID 
TIGRFAM ID[TIGR02509] type III secretion effector, YopR family 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTTA CCCTTAATAG AGGTTCCATT ACATCGTTGA TGTCTTCGTC TCAGGCAGTC 
TCTACGCTAC AACCGGTAGC ATCTGAGCTG AAAACACAAC TGGAGAATAA GCTAAAAAGT
GAATCCGCTG AAAAGACACG GGAAGTTCTG TGGCAGCAAT ATTATGCCAG TAACCCTCCT
GACCATGCCG TTCTTGAGGT TTTGGCGACG CCAGTACGTG AGGCGTTACT GGCGCGTTTC
GGTCAACATC AAGGGTCTGT TGTACCGGCT ATAGATTTAC CTGAATTGCG TAGTGTATTG
CAGCAGTTTG ACTCGTTTGG TAAGCGGTGG GAAGCAATAT TGCTCCAAGT ATTAGAGGGT
ATAAAACCCA ATGAGAGCCA GGTTGGATTA CCTTATTTAT CAGAGTTAAT AAATAAAGAA
TTAATGATCC TATTACCGTC TAACTCGATT GTAGATAGCC TACTTCATAA CAGCCATCAA
ATTGATATGG ATACATAA
 
Protein sequence
MTVTLNRGSI TSLMSSSQAV STLQPVASEL KTQLENKLKS ESAEKTREVL WQQYYASNPP 
DHAVLEVLAT PVREALLARF GQHQGSVVPA IDLPELRSVL QQFDSFGKRW EAILLQVLEG
IKPNESQVGL PYLSELINKE LMILLPSNSI VDSLLHNSHQ IDMDT