| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0047 |
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| Symbol | yscT |
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| ID | 5798271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010157 |
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| Strand | + |
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| Start bp | 30808 |
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| End bp | 31593 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641337858 |
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| Product | type III secretion apparatus protein YscT |
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| Protein accession | YP_001604478 |
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| Protein GI | 162417741 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0000121402 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAGCGG ATTTAATCCA AAGACCATTG CTCACTTATA CCCTGCTGTT GCCTCGTTTT
ATGGCTTGTT TTGTTATATT GCCAGTGTTA AGTAAACAGC TCCTCGGTGG AGTATTGCTG
CGTAATGGTA TTGTCTGTTC ATTGGCTCTT TATGTCTATC CTGCCGTCGC TAACCAACCT
TATATTGAGG TTGATGCGTT TACGTTGATG CTGCTTATCG GCAAAGAGAT CATACTGGGG
TTATTGATTG GGTTTGTGGC CACCATTCCT TTCTGGGCCT TAGAATCCGC AGGATTTATT
GTAGATAACC AAAGAGGTGC CGCGATGGCA TCTCTACTCA ATCCTGGACT TGATAGTCAA
ACTAGTCCGA CTGGTTTACT TTTGACTCAA ACGTTAATAA CAATTTTCTT CAGCGGAGGG
GCTTTCCTCT CTTTGCTTTC AGCCCTCTTT CACAGCTATG TAAATTGGCC GGTGGCCAGC
TTTTTCCCTG CAGTTAGTGA ACAGTGGGTT GATTTCTTTT ATAACCAATT CAGCCAGATA
CTATTAATCG CCGCTGTATT GGCTGCTCCT TTACTCATCG CTATGTTTTT AGCTGAATTT
GGACTTGCAC TCATCAGTCG TTTTGCGCCT TCTTTAAACG TCTTTGTGCT GGCTATGCCG
ATAAAAAGCG CGATAGCAAG CCTGTTGTTG GTTATCTACT GTATGCAAAT GATGAGTCAT
GCCAGTAAAG CAATGCTGTT GGTTATGGAT CCTATAAGTT TACTGATCCC TGTTTTGGAG
AAGTAA
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| Protein sequence | MIADLIQRPL LTYTLLLPRF MACFVILPVL SKQLLGGVLL RNGIVCSLAL YVYPAVANQP
YIEVDAFTLM LLIGKEIILG LLIGFVATIP FWALESAGFI VDNQRGAAMA SLLNPGLDSQ
TSPTGLLLTQ TLITIFFSGG AFLSLLSALF HSYVNWPVAS FFPAVSEQWV DFFYNQFSQI
LLIAAVLAAP LLIAMFLAEF GLALISRFAP SLNVFVLAMP IKSAIASLLL VIYCMQMMSH
ASKAMLLVMD PISLLIPVLE K
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