| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0043 |
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| Symbol | yscP |
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| ID | 5798302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010157 |
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| Strand | + |
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| Start bp | 27606 |
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| End bp | 28973 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641337854 |
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| Product | type III secretion system needle length determinant YscP |
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| Protein accession | YP_001604474 |
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| Protein GI | 162417754 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02514] type III secretion system needle length determinant |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 5.35952e-19 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA TCACCACTCG TTCCCCATTA GAACCTGAGT ATCAACCTCT GGGGAAGCCG
CATCATGCTT TGCAAGCATG TGTCGATTTT GAGCAAGCGC TGTTGCATAA TAATAAGGGG
AATTGTCATC CCAAAGAAGA GTCGCTTAAA CCTGTACGTC CGCATGACCT TGGCAAAAAA
GAAGGTCAGA AAGGAGATGG CTTGCGTGCG CATGCGCCAT TAGCGGCGAC GTCTCAACCC
GGAAGGAAAG AGGTAGGATT AAAACCTCAA CACAACCATC AGAATAATCA TGATTTCAAC
TTATCTCCGC TTGCCGAAGG TGCTACCAAT AGAGCGCACT TATACCAGCA GGATAGCCGT
TTTGATGACC GCGTAGAGAG TATTATTAAT GCTCTCATGC CATTGGCGCC CTTTTTAGAG
GGGGTGACTT GTGAAACGGG GACATCAAGT GAATCCCCCT GCGAGCCGTC TGGACATGAT
GAGTTATTTG TTCAGCAATC GCCTATCGAT TCCGCTCAAC CAGTTCAATT GAATAGCAAG
CCGACTGTTC AGCCATTGAA TCCGGCTGCT GACGGCGCAG AGGTTATTGT ATGGTCTGTC
GGTAGGGAAA CTCCGGCCAG TATAGCAAAA AACCAGCGCG ATAGCAGGCA AAAACGCCTT
GCAGAAGAAC CGTTAGCTCT TCATCAAAAA GCATTGCCAG AGATATGTCC CCCGGCAGTT
AGTGCCACAC CGGATGATCA TTTGGTAGCA AGATGGTGTG CTACTCCTGT GACTGAGGTA
GCAGAAAAAT CTGCTCGTTT TCCGTACAAA GCGACAGTGC AGTCAGAGCA ACTGGACATG
ACCGAGCTGG CGGATCGGTC CCAACATCTT ACTGATGGCG TTGATAGCAG CAAAGATACC
ATCGAACCAC CGCGACCAGA AAAACTGTTA CTTCCGCGCG AAGAAACCTT GCCGGAGATG
TATTCCTTGT CTTTTACAGC ACCGGTTGTC ACGCCGGGTG ATCACCTATT AGCAACAATG
CGCGCGACCA GGCTGGCATC AGTCTCAGAG CAACTTATAC AGTTAGCACA GCGACTAGCG
GTAGAACTAG AACTGCGCGG CGGCTCATCC CAAGTAACCC AATTACACCT TAACTTACCT
GAATTGGGGG CTATTATGGT TCGTATTGCT GAGATTCCGG GAAAACTGCA TGTAGAACTG
ATCGCCAGTC GGGAAGCTTT AAGAATTTTA GCGCAGGGAA GTTATGATCT TCTTGAGCGA
TTACAACGCA TTGAGCCAAC ACAACTTGAT TTTCAAGCTA GCGATGACAG TGAACAGGAG
TCACGTCAGA AACGCCACGT CTATGAGGAG TGGGAGGCTG AAGAATGA
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| Protein sequence | MNKITTRSPL EPEYQPLGKP HHALQACVDF EQALLHNNKG NCHPKEESLK PVRPHDLGKK
EGQKGDGLRA HAPLAATSQP GRKEVGLKPQ HNHQNNHDFN LSPLAEGATN RAHLYQQDSR
FDDRVESIIN ALMPLAPFLE GVTCETGTSS ESPCEPSGHD ELFVQQSPID SAQPVQLNSK
PTVQPLNPAA DGAEVIVWSV GRETPASIAK NQRDSRQKRL AEEPLALHQK ALPEICPPAV
SATPDDHLVA RWCATPVTEV AEKSARFPYK ATVQSEQLDM TELADRSQHL TDGVDSSKDT
IEPPRPEKLL LPREETLPEM YSLSFTAPVV TPGDHLLATM RATRLASVSE QLIQLAQRLA
VELELRGGSS QVTQLHLNLP ELGAIMVRIA EIPGKLHVEL IASREALRIL AQGSYDLLER
LQRIEPTQLD FQASDDSEQE SRQKRHVYEE WEAEE
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