| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0042 |
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| Symbol | yscO |
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| ID | 5798288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010157 |
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| Strand | + |
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| Start bp | 27142 |
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| End bp | 27606 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641337853 |
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| Product | type III secretion protein YscO |
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| Protein accession | YP_001604473 |
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| Protein GI | 162417817 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00000000000384931 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATACGCC GCCTGCACCG GGTTAAAGTT TTACGCGTTG AACGTGCGGA GAAAGCCATC
AAGACTCAGC AAGCTTGCTT GCAGGCAGCT CATCGACGTC ATCAAGAGGC GGTGCAAACC
AGTCAGGATT ACCATTTGTG GCGTATTGAT GAGGAGCAAC GTCTATTTGA TCAGCGAAAA
AACACCACAC TGAATTGTAA AGATTTGGAG AAATGGCAGC GACAAATAGC GTCGCTACGT
GAAAAGGAGG CCAATTATGA ACTGGAGTGC GCCAAATTAT TGGAACGTTT AGCCAATGAG
CGTGAGCGCC TTACGTTATG CCAAAAGATG CTGCAACAGG CTCGTCATAA GGAAAATAAG
TTTCTCGAGC TAGTGCGACG AGAAGATGAA GATGAGCTAA ATCAACAACA TTATCAGGAA
GAACAAGAAC AAGAAGAGTT TCTACAGCAT CACAGGAACG CCTAA
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| Protein sequence | MIRRLHRVKV LRVERAEKAI KTQQACLQAA HRRHQEAVQT SQDYHLWRID EEQRLFDQRK
NTTLNCKDLE KWQRQIASLR EKEANYELEC AKLLERLANE RERLTLCQKM LQQARHKENK
FLELVRREDE DELNQQHYQE EQEQEEFLQH HRNA
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