| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0041 |
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| Symbol | yscN |
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| ID | 5798247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010157 |
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| Strand | + |
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| Start bp | 25826 |
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| End bp | 27145 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641337852 |
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| Product | type III secretion system ATPase |
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| Protein accession | YP_001604472 |
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| Protein GI | 162417750 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0000000570854 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 84 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCAC TAGATCAGAT ACCTCATCAT ATTCGTCATG GCATTGTAGG TAGCCGCCTA
ATCCAAATTA GAGGACGTGT CACTCAAGTG ACAGGAACGT TATTAAAAGC GGTAGTGCCA
GGTGTGCGCA TCGGTGAGTT ATGTTACTTA CGTAACCCTG ACAACAGCCT GTCTTTACAG
GCTGAAGTCA TAGGTTTTGC CCAACATCAA GCATTACTTA TTCCACTTGG TGAAATGTAC
GGGATATCTT CTAATACTGA AGTTAGCCCG ACAGGGACAA TGCATCAGGT TGGGGTGGGT
GAACATCTGC TGGGACAGGT GTTGGATGGT TTAGGGCAGC CTTTCGATGG GGGGCATCTC
CCTGAACCGG CGGCTTGGTA CCCAGTTTAT CAGGATGCCC CAGCGCCGAT GAGCCGAAAA
CTTATTACCA CACCACTTTC TTTGGGGATC CGGGTTATTG ACGGTTTGCT TACCTGTGGC
GAGGGGCAAA GAATGGGCAT CTTCGCGGCC GCCGGGGGGG GGAAAAGTAC ACTGCTTGCT
TCGCTTATTC GTAGTGCTGA AGTAGACGTA ACCGTGCTGG CGCTTATTGG TGAGCGTGGA
CGCGAAGTGC GTGAGTTTAT TGAGTCTGAT TTAGGCGAAG AGGGGTTACG CAAAGCGGTT
CTCGTGGTGG CCACCTCGGA TCGGCCCTCA ATGGAAAGAG CCAAAGCTGG ATTCGTGGCG
ACATCTATTG CTGAATATTT TCGCGATCAA GGGAAACGCG TATTGTTACT TATGGACTCT
GTAACACGGT TTGCTCGTGC TCAGCGTGAA ATAGGCTTAG CTGCGGGAGA ACCACCGACT
CGCCGCGGTT ATCCTCCGTC AGTATTTGCC GCTTTACCCC GTTTGATGGA AAGGGCTGGT
CAGTCCAGCA AAGGGTCAAT TACGGCTCTC TATACCGTAC TGGTCGAAGG GGACGATATG
ACCGAACCCG TGGCCGACGA AACACGTTCG ATACTTGATG GTCATATTAT TCTGTCACGG
AAATTAGCGG CAGCTAATCA TTATCCTGCC ATTGACGTAT TACGTTCAGC GAGCAGGGTG
ATGAATCAAA TTGTCAGCAA GGAGCACAAA ACCTGGGCGG GGGACTTACG CCGTTTATTG
GCCAAATATG AAGAAGTGGA ATTGCTGTTG CAAATCGGGG AGTACCAGAA AGGGCAAGAC
AAAGAGGCCG ATCAAGCGAT TGAACGCATG GGGGCGATTC GAGGATGGCT CTGCCAGGGG
ACGCACGAGT TAAGCCATTT CAATGAGACG CTGAACTTAT TGGAGACGCT GACCCAATGA
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| Protein sequence | MLSLDQIPHH IRHGIVGSRL IQIRGRVTQV TGTLLKAVVP GVRIGELCYL RNPDNSLSLQ
AEVIGFAQHQ ALLIPLGEMY GISSNTEVSP TGTMHQVGVG EHLLGQVLDG LGQPFDGGHL
PEPAAWYPVY QDAPAPMSRK LITTPLSLGI RVIDGLLTCG EGQRMGIFAA AGGGKSTLLA
SLIRSAEVDV TVLALIGERG REVREFIESD LGEEGLRKAV LVVATSDRPS MERAKAGFVA
TSIAEYFRDQ GKRVLLLMDS VTRFARAQRE IGLAAGEPPT RRGYPPSVFA ALPRLMERAG
QSSKGSITAL YTVLVEGDDM TEPVADETRS ILDGHIILSR KLAAANHYPA IDVLRSASRV
MNQIVSKEHK TWAGDLRRLL AKYEEVELLL QIGEYQKGQD KEADQAIERM GAIRGWLCQG
THELSHFNET LNLLETLTQ
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