| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0037 |
|---|
| Symbol | yscX |
|---|
| ID | 5798263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010157 |
|---|
| Strand | - |
|---|
| Start bp | 23765 |
|---|
| End bp | 24133 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641337848 |
|---|
| Product | type III secretion protein YscX |
|---|
| Protein accession | YP_001604468 |
|---|
| Protein GI | 162417797 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02502] type III secretion protein, YscX family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 0.060691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 0.904901 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCGCA TAATAACTGC CCCCCATATT GGCATCGAAA AACTGTCGGC GATTAGCCTG
GAAGAGCTAT CCTGTGGCTT GCCTGAACGT TATGCCTTGC CGCCTGATGG GCATCCAGTC
GAACCACATT TAGAGCGCCT TTACCCTACA GCACAAAGCA AGCGTAGCCT ATGGGATTTT
GCTTCTCCCG GCTATACATT TCATGGATTA CATCGAGCTC AAGATTATCG GCGCGAACTG
GATACCTTGC AGTCACTGCT AACCACCAGT CAGTCCTCAG AGCTACAAGC TGCCGCGGCG
CTGCTTAAAT GCCAACAAGA TGATGATCGG TTACTGCAAA TAATCCTTAA CCTGTTGCAC
AAAGTATGA
|
|---|
| Protein sequence | MSRIITAPHI GIEKLSAISL EELSCGLPER YALPPDGHPV EPHLERLYPT AQSKRSLWDF
ASPGYTFHGL HRAQDYRREL DTLQSLLTTS QSSELQAAAA LLKCQQDDDR LLQIILNLLH
KV
|
|---|
| |