| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0025 |
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| Symbol | yopM |
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| ID | 5798276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010157 |
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| Strand | - |
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| Start bp | 14102 |
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| End bp | 15268 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641337837 |
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| Product | effector protein YopM |
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| Protein accession | YP_001604457 |
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| Protein GI | 162417819 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.012796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 0.260783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGTTT TTGTTTGCAG TGAAAAACTC GATAATAAAA ATATTTTCAG AAAGGCATTC
AATATGTTCA TAAATCCAAG AAATGTATCT AATACTTTTT TGCAAGAACC ATTACGTCAT
TCTTCTAATT TAACTGAGAT GCCGGTTGAG GCAGAAAATG TTAAATCTAA GACTGAATAT
TATAATGCAT GGTCGGAATG GGAACGAAAT GCCCCTCCGG GGAATGGTGA ACAGAGGGAA
ATGGCGGTTT CAAGGTTACG AGATTGCCTG GACCGACAAG CCCATGAGCT AGAACTAAAT
AATCTGGGGC TGAGTTCTTT GCCGGAATTA CCTCCGCATT TAGAGAGTTT AGTGGCGTCA
TGTAATTCTC TTACAGAATT ACCGGAATTA CCGCAGAGCC TGAAATCACT TCTAGTTGAT
AATAACAATC TGAAGGCATT ATCCGATTTA CCACCTTTAC TGGAATATTT AGGTGTCTCT
AATAATCAGC TGGAAAAATT GCCAGAGTTG CAAAACTCGT CCTTCTTGAA AATTATTGAT
GTTGATAACA ATTCACTGAA AAAACTACCT GATTTACCTC TTTCACTGGA ATCTATTGTT
GCTGGTAATA ATATTCTGGA AGAATTGCCA GAGTTGCAAA ACTTGCCCTT CTTGACTACG
ATTTATGCTG ATAACAATTT ACTGAAAACA TTACCCGATT TACCCCCTTC CCTGGAAGCA
CTTAATGTCA GAGATAATTA TTTAACTGAT CTGCCAGAAT TACCGCAGAG TTTAACCTTC
TTAGATGTTT CTGAAAATAT TTTTTCTGGA TTATCGGAAT TGCCACCAAA CTTGTATTAT
CTCAATGCAT CCAGCAATGA AATAAGATCC TTATGCGATT TACCCCCTTC ACTGGAAGAA
CTTAATGTCA GTAATAATAA GTTGATCGAA CTGCCAGCGT TACCTCCACG CTTAGAACGT
TTAATCGCTT CATTTAATCA TCTTGCTGAA GTACCTGAAT TGCCGCAAAA CCTGAAACAG
CTCCACGTAG AGTACAACCC TCTGAGAGAG TTTCCCGATA TACCTGAGTC AGTGGAAGAT
CTTCGGATGA ACTCTGAACG TGTAGTTGAT CCATATGAAT TTGCTCATGA GACTACAGAC
AAACTTGAAG ATGATGTATT TGAGTAG
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| Protein sequence | MYVFVCSEKL DNKNIFRKAF NMFINPRNVS NTFLQEPLRH SSNLTEMPVE AENVKSKTEY
YNAWSEWERN APPGNGEQRE MAVSRLRDCL DRQAHELELN NLGLSSLPEL PPHLESLVAS
CNSLTELPEL PQSLKSLLVD NNNLKALSDL PPLLEYLGVS NNQLEKLPEL QNSSFLKIID
VDNNSLKKLP DLPLSLESIV AGNNILEELP ELQNLPFLTT IYADNNLLKT LPDLPPSLEA
LNVRDNYLTD LPELPQSLTF LDVSENIFSG LSELPPNLYY LNASSNEIRS LCDLPPSLEE
LNVSNNKLIE LPALPPRLER LIASFNHLAE VPELPQNLKQ LHVEYNPLRE FPDIPESVED
LRMNSERVVD PYEFAHETTD KLEDDVFE
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