Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | COXBURSA331_A1852 |
Symbol | rfaF |
ID | 5794202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii RSA 331 |
Kingdom | Bacteria |
Replicon accession | NC_010117 |
Strand | - |
Start bp | 1690050 |
End bp | 1691081 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641331204 |
Product | lipopolysaccharide heptosyltransferase II |
Protein accession | YP_001597491 |
Protein GI | 161830744 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGCA GCAAAAAAAT TTTGATCGTG GGCCCGGCTT GGGTGGGTGA TATGGTGATG GCGCAGACGT TATTTATGTG CCTAAAGCAC CGATATCCTG ACGCTCAAAT TGACGTCCTC GCGCCAGCGT GGACTAAGCC GTTGCTGGAG GGGATGCCGG AAATCAGCGG TACGATTGAT TCACCTTTTG GTCATGGGGA CGTGCGATTA AGGGAACGGT ATCGCCTGGG TGTGGCTTTG CGAGAACGAG GCTACGACCA AGCCATTGTG CTACAAAATT CGTATAAATC CGCGTTGATC CCTTATTGGG CCAATATACC GCAACGCACC GGGTGGGTGG GTGAGATGCG TTATGGATTG CTAAACGACA TTCGCCGGTT AGATAAAAAG CGTTTACCAC TGATGATCCA TCGTTACATT GCTCTTGGGT TGGGCAAAGG TGTACCCCTG CCGATAGACT TGCCCCGACC TCAATTGCGA ATCTCACCGG CCAAAAGAAC CACGGCGTTA AGTCGATTAG CGCTCCAAGA ACCCGCTGCC CCATTGTTAG CCCTCTGCCC AGGGGCTGAA TTCGGCCCGG CCAAGCAATG GCCAGCGGAA TATTATGCTG AAGTTGCTAA GAAGAAATTG GCGGATGGAT GGCAGGTATG GATATTCGGT TCTTCAAAAG ATAAAGTGGC TGCGGATCGC ATCGAATCGT TAACGGAAGG TCGCGCTCGA AATTTGGCGG GCGTGACGAC ACTCAGCGAG GCTGTCGATT TGCTTTCCTT GGCTTCGGGA GTGATAGCCA ATGATTCGGG TTTACTCCAT GTGGCCGCTG CTTTAGGCCG TCCGGTAATC GCCGTGTATG GTCCCACGAC GCCTTCATTT ACGCCGCCTT TATCCAAAAA AGCCGAGACA GCAAAATTGG ATTTACCGTG CAGCCCGTGT TTTAAACGAG AATGTCCCTA TGGGCATCAA CAATGTATGA AGTCGTTGAA GCCGGCTATG ATATTGGAAA CGATGGAAAA AATGAATTAC GTTTCGCTCT GA
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Protein sequence | MNSSKKILIV GPAWVGDMVM AQTLFMCLKH RYPDAQIDVL APAWTKPLLE GMPEISGTID SPFGHGDVRL RERYRLGVAL RERGYDQAIV LQNSYKSALI PYWANIPQRT GWVGEMRYGL LNDIRRLDKK RLPLMIHRYI ALGLGKGVPL PIDLPRPQLR ISPAKRTTAL SRLALQEPAA PLLALCPGAE FGPAKQWPAE YYAEVAKKKL ADGWQVWIFG SSKDKVAADR IESLTEGRAR NLAGVTTLSE AVDLLSLASG VIANDSGLLH VAAALGRPVI AVYGPTTPSF TPPLSKKAET AKLDLPCSPC FKRECPYGHQ QCMKSLKPAM ILETMEKMNY VSL
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