| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | COXBURSA331_A1598 |
|---|
| Symbol | truB |
|---|
| ID | 5793624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii RSA 331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010117 |
|---|
| Strand | - |
|---|
| Start bp | 1461502 |
|---|
| End bp | 1462431 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641330982 |
|---|
| Product | tRNA pseudouridine synthase B |
|---|
| Protein accession | YP_001597274 |
|---|
| Protein GI | 161830815 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0130] Pseudouridine synthase |
|---|
| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00177839 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGA CGAATCATCC TAAACTGTTT AAACGTCCCG TGGATGGCGT TTTATTGTTA
GATAAGCCGG GCGGGATGAC CTCCAACGAG GCACTGCAGC GCGTTAAGCG CTTATTTCAC
GCGAAAAAAG CAGGACATAC GGGGAGTTTA GATCCGCTTG CCACCGGACT CTTGCCGATT
TGTTTAGGCG AAGCGACTAA ATTTTCTCAA TTTCTTTTGG AAGCGGATAA ATCCTATAGT
GTCAAAGGCC GATTAGGTGT TCGTACCGCA AGTGGGGACA GTGAAAGTCC CATTCTTACA
GAATGCCCTA TTCCCAAACT CACAAAACGG GCATTGGAAA AAACTTTATT CGCCTTTCGT
GGCGTTATTG ATCAAACGCC TTCCATGTAT TCCGCCTTAA AACATAAAGG CCAACCGTTG
TATAAACTCG CGCGGCAAGG AATTGAGGTC GAGCGTAAAA CACGGCAGGT TACTATTTAC
GAGTTAACTT TGTTGGACTG GGATAACGAA TCGATTGAAC TTTATGTGCA TTGCAGTAAG
GGCACTTATA TCAGAACGTT ACTCGATGAT GTGGGTGAAG CGCTCGGTTG CGGCGCTCAT
GTTGTCGCGC TGCGCCGACT TCGCGTGGCT CATTATCACG AAGATCAAAT GATCAAACTC
GCCCATTTGG AACGAGAATA CGATAAAGCA AATTATACCG GGTTAGACCG CTACTTATTA
CCTCTAGAAA CAATGGTCTC CCATTTCCCC GCGATCAAGT TATCAAGTTC AACTGCTTTT
TATTTACAAC AAGGCCAAGC CGTAATGGTC CCAAACGCAC CAACCCACGG TTTCGTGCGC
TTACGCGATC AGAACGATCA ATTTATCGGC ATCGGAGAAA TTTTAAGCGA CGCCCGAATT
GCCCCGCGAA GGCTGATTCA GAAGAGGTGA
|
|---|
| Protein sequence | MTATNHPKLF KRPVDGVLLL DKPGGMTSNE ALQRVKRLFH AKKAGHTGSL DPLATGLLPI
CLGEATKFSQ FLLEADKSYS VKGRLGVRTA SGDSESPILT ECPIPKLTKR ALEKTLFAFR
GVIDQTPSMY SALKHKGQPL YKLARQGIEV ERKTRQVTIY ELTLLDWDNE SIELYVHCSK
GTYIRTLLDD VGEALGCGAH VVALRRLRVA HYHEDQMIKL AHLEREYDKA NYTGLDRYLL
PLETMVSHFP AIKLSSSTAF YLQQGQAVMV PNAPTHGFVR LRDQNDQFIG IGEILSDARI
APRRLIQKR
|
|---|
| |