| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | COXBURSA331_A1455 |
|---|
| Symbol | smpB |
|---|
| ID | 5794401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii RSA 331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010117 |
|---|
| Strand | + |
|---|
| Start bp | 1332410 |
|---|
| End bp | 1332889 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641330860 |
|---|
| Product | SsrA-binding protein |
|---|
| Protein accession | YP_001597155 |
|---|
| Protein GI | 161830789 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0691] tmRNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0000318181 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC AAATTTCCAA AAAACCGGCA CAACGAACTA TCGCTTTGAA TAAAAAGGCA
TTACACGACT ATTACGTTGA GCAGCGATTT GAGGCGGGGC TGGTGTTGGA AGGTTGGGAA
GTCAAAAGTA TTCGCGCGGG CCGCGTGCAG TTGCGGGATA GCTATGTTGT TTTTAAAGGC
GGTGAAGCCT GGTTAATTGG TGCGCACCTC TCCCCGCTCC CCAATGTCGC AGAATATATG
AAAGCTGACC CTCAACGTTC GCGGAAATTG CTTTTGAACA AGCCTGAAAT TGGAAAACTG
TTTGGAGCAG TTCAAAAACA AGGCTTAACG GTGGTTCCGC TGGATTTACA TTGGCATAAA
AATCATGTCA AAGTTGAAAT TGCCCTTGCA AAGGGCAAAA AAACCCACGA TAAGCGAGAA
ACCATCAAAC GCCGCGAGTG GGAGCGCGAG AAACATCGCG TGTTGAAATC TCATGGATAA
|
|---|
| Protein sequence | MNKQISKKPA QRTIALNKKA LHDYYVEQRF EAGLVLEGWE VKSIRAGRVQ LRDSYVVFKG
GEAWLIGAHL SPLPNVAEYM KADPQRSRKL LLNKPEIGKL FGAVQKQGLT VVPLDLHWHK
NHVKVEIALA KGKKTHDKRE TIKRREWERE KHRVLKSHG
|
|---|
| |