| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | COXBURSA331_A1088 |
|---|
| Symbol | |
|---|
| ID | 5794288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Coxiella burnetii RSA 331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010117 |
|---|
| Strand | - |
|---|
| Start bp | 961687 |
|---|
| End bp | 963294 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641330542 |
|---|
| Product | ankyrin repeat-containing protein |
|---|
| Protein accession | YP_001596844 |
|---|
| Protein GI | 161829809 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00161551 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATT ATACAGGCTT GAGAGCAACC GCACAGGAAG TCAAAAACAC TCGATTTATA
TTAGACAGCA TTAAACATCA ATTTTCGAAA GTAGGAAAGC AGAGTGATTT TCCGCGTGCG
CTCGAAGCCG TTTTACTTGA TTTTTTAGCA ATGGGAAATA GAGAGGTAGT CGAAAGGACT
TTGATTGCTC AAAACAAAAC GGCGCATGAT TTTAATCGCG ATCGCTTGGT TGAGCGCGTG
CTTTTTAGCG GTGGAGAACC ACAGCAAGTG AGCGAAAAAA TGATGTGGTG TATTGGAAAA
GCAGGACTCG ATCCTAATAC AAAATATGGC GGTAAGTCTG TGCTCTTGCA TTGTTTGGAA
GCAAAAGCTT ATATAGCAGC GAGATGGTTA ATCGAGAAAA ATGGCATTAG CGTACGCGGT
AACGCTGCGG TGATTGAAGT GGTTCTATCG AAAGCTCTGT CAGAAAAGGA CTTTCTTTTT
TCTGTTTATT TGGTGGAACA AGGGGCTGTG CTGGAGCGGG AATCCGACGT TTTAATTAAT
GCCATCCAGC CTTTTGACCC GGAAAATCCA AAAAATAATA TAAGACGAGT GCTGTGGTTA
ATTGAGCGTG GCGTGAATGT TAATTTCTCA GCGGAAGGAG GTAAAACCGC ACTTAGCGCA
GCGGTTGAAG CTGGGGATGT GTATAGTGCA ATATTCCTCA TGGAGAAAGG CGCGAAGCTG
CCCAATTTTA ATGTTGTTCC TGGTGAAAAT ATAAAAACGC AAGCGGACTA TATGTGGTTT
GAGGGCGCCT TATTAAGTGG TTGTGTTGAG ATGTGTTATT GGTTGGCTGT GTATTGTCCC
TTTATTCCCA CCCATTTCCC CGACACCTTC GTTAGACTGG GTCGCGAACG TGAACGGTAC
GGTCGATCGT TCGTTCCTGT GATCAATTGG ATGCTTGATC GGGGTATTGA TCCTAACTGC
ACGGATGAAA AGGGAGCAAC CTTGAGTGAT GTGATCCTCT TAGCGCAGGG GACTGATGTG
CCGGATATTC GATTGCTCAA TCTCTTAACC GAAAGACAAA TCGATGCGTC TAGCGCTATT
CAAAAATATG GTGCTGACGC TCTAAACCGC GCTACAAAAT GCTTTAGTCC TTCTCGCAAA
GATCAACTGT TTCCCGTCAT TGATGGGCTG CTCATAAACG GCGTTGATAT AAATGCGGCG
AAACCTTTAA CCTACGCTGA TGTTTGGAAT CAGCCGCTGC TCGTCGAAAA ATTACTAGAA
GCCGGCGCGT GTTCCGACGT GGTACTGGCA AACCGTGTAT CGAAAAAGCG GTCGCAACTA
GAGCATTTAT TTGAGAAAAA ACCCGATCGA GGATCACACC GTTTCTTTGG GTGTTTTCCT
TGGAAGGATC GGAATGACGA GAAAGAGGGG GAAAGCGCTT GGTTTACAGA GGAGTTCTGT
AAGCCCTTAA AATATACTGA CTTGTTGCGC AATGAGCAGC CAGATGATGA AAAAAAGGAG
CATCCCAGAG CGTGGCAAGT TCTTGCAGAG GAGGGCGTGC AGAGCGCGCC TTCGGCGCGC
CTGTGCCTGC GCGGGAATGA CGGAACTGTA AGAGTCAAAT TGCTGTGA
|
|---|
| Protein sequence | MPDYTGLRAT AQEVKNTRFI LDSIKHQFSK VGKQSDFPRA LEAVLLDFLA MGNREVVERT
LIAQNKTAHD FNRDRLVERV LFSGGEPQQV SEKMMWCIGK AGLDPNTKYG GKSVLLHCLE
AKAYIAARWL IEKNGISVRG NAAVIEVVLS KALSEKDFLF SVYLVEQGAV LERESDVLIN
AIQPFDPENP KNNIRRVLWL IERGVNVNFS AEGGKTALSA AVEAGDVYSA IFLMEKGAKL
PNFNVVPGEN IKTQADYMWF EGALLSGCVE MCYWLAVYCP FIPTHFPDTF VRLGRERERY
GRSFVPVINW MLDRGIDPNC TDEKGATLSD VILLAQGTDV PDIRLLNLLT ERQIDASSAI
QKYGADALNR ATKCFSPSRK DQLFPVIDGL LINGVDINAA KPLTYADVWN QPLLVEKLLE
AGACSDVVLA NRVSKKRSQL EHLFEKKPDR GSHRFFGCFP WKDRNDEKEG ESAWFTEEFC
KPLKYTDLLR NEQPDDEKKE HPRAWQVLAE EGVQSAPSAR LCLRGNDGTV RVKLL
|
|---|
| |