Gene COXBURSA331_A0758 details

Gene Information

• Locus tag: COXBURSA331_A0758
• Symbol: ribD
• ID: 5794405
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Coxiella burnetii RSA 331
• Kingdom: Bacteria
• Replicon accession: NC_010117
• Strand: +
• Start bp: 673016
• End bp: 674080
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 641330252
• Product: riboflavin biosynthesis protein RibD
• Protein accession: YP_001596568
• Protein GI: 161830583
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0117] Pyrimidine deaminase; [COG1985] Pyrimidine reductase, riboflavin biosynthesis
• TIGRFAM ID: [TIGR00227] riboflavin-specific deaminase C-terminal domain; [TIGR00326] riboflavin biosynthesis protein RibD

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGATT CTTCGCTTGA TTATTTAAAA AAAGCGCTTT CATTAGCAGA AATAAGGCGG 
GGTTTTTGTG CGCCTAATCC TTCGGTGGGT GCTGTGGTGG TTAAAGATGA TAAAATCATT 
TCAACGGGTT TTCACAAACG CAGTGGACTC CCTCACGCGG AAGTAGAAGC GATAAAATCC 
CTGGGTGATA AGGCTCGCGG GGCTGCTTTA TATGTCACTC TAGAACCTTG CTGTCATTTT 
GGGAAAACGC CTCCGTGTAC GGATTTAATT ATCCAATCGG GGATTAAAGA CGTTTATTAT 
GGGTTGCATG ATCCTAATTT AGCTGTTTGT GGCAAAGGTA TTGAGCAGTT GCAACGCGCA 
GGAGTGAATT GTTTTTTAAT AGAATTGCCT GAAATTAACG CGTTTTATGA AAGTTATCGT 
TATTGGATAA AACATAAACG CCCGTGGGTG ACGGCCAAAT TAGCGCTGAG TTTGGATGGG 
AAAATTGTAG GCAACGAGGG TAAACCAGTT CGTTTGACTG GGGAAGGATT AAGACAATAT 
ACCCATGAGC GGCGAAAGAA AAGTGATGCG TTATTAACAA CGATTAATAC AATTTTAACC 
GATGATCCCA AACTCAATGT CCGTCTCCAG GGTGAAGAAA TAAAAAAACC TATTTATATT 
TTGGATACGC ATTTACGTTT GCCGCTTAAT GCGCTAATTC ATCAAACGGC TGAATCAATA 
ATTGTGTTTC ATGGGAATGA AGCTGATAAA AAACAGCAAC AAAGGTTAAT GCAGAAAAAT 
ATTCGGTGCA TAGAAATCGC TCGTAGGTCT GAAGGATTAG ACTTAAATGA AGTGCTTGAC 
GTCATTGGAA ACGATGGCAT TCACGATTTA TGGATTGAAG CGGGTGGAAC GTGTTTTCAG 
TCTTTTTTAA AAGAAAATCT CATCAACCGT GCTTTAATTT ATATCGCTCC AAAAATTCTT 
GGTTCAACCG CCATGCCTGC TTTCCAACTA CCATTTTCTT TTTCCGGATA TTCAGTGGAG 
TGGCGTCAAT TTGGAGAAGA TGTTATGGGA GAGATTCGCT TCTGA 

 

Protein sequence

MNDSSLDYLK KALSLAEIRR GFCAPNPSVG AVVVKDDKII STGFHKRSGL PHAEVEAIKS 
LGDKARGAAL YVTLEPCCHF GKTPPCTDLI IQSGIKDVYY GLHDPNLAVC GKGIEQLQRA 
GVNCFLIELP EINAFYESYR YWIKHKRPWV TAKLALSLDG KIVGNEGKPV RLTGEGLRQY 
THERRKKSDA LLTTINTILT DDPKLNVRLQ GEEIKKPIYI LDTHLRLPLN ALIHQTAESI 
IVFHGNEADK KQQQRLMQKN IRCIEIARRS EGLDLNEVLD VIGNDGIHDL WIEAGGTCFQ 
SFLKENLINR ALIYIAPKIL GSTAMPAFQL PFSFSGYSVE WRQFGEDVMG EIRF