Gene COXBURSA331_A0655 details

Gene Information

• Locus tag: COXBURSA331_A0655
• Symbol: ligA
• ID: 5794484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Coxiella burnetii RSA 331
• Kingdom: Bacteria
• Replicon accession: NC_010117
• Strand: +
• Start bp: 566697
• End bp: 568709
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641330157
• Product: DNA ligase, NAD-dependent
• Protein accession: YP_001596473
• Protein GI: 161831535
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II)
• TIGRFAM ID: [TIGR00575] DNA ligase, NAD-dependent

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAAGTTC CTGCAAAAAT TCAAAAGCGG ATCGAGCGGT TGCGCCATGA AATTAATGAT 
CATAATTATC GTTATTACGT ATTATCACAG CCCACTATTC CCGACTCCGT TTATGATGAA 
CTTTTTCATG AGTTAGAAAA GTTAGAGAAA AAATACCCTG AAACAATCAC GCCTTCGTCT 
CCTACGCAAC GCGTAGGTGC TGAGCCATTA AAAGTGTTTG AACCCGTTCA TCATGAAATT 
CCGATGTTAT CGCTGGATAA CGTGTTTGAT GAAAAAGGGT TGCGGGCTTT TGATAAACGC 
ATTCGGCAGC GATTGAAACT CGATAAACCC TTCGAATATG TGTGTGAACC AAAGATGGAT 
GGTGTCGCCC TCAGTTTACT TTACGAAAAT GGCGAATTAA TTCGGGCCGC CACGCGGGGA 
GATGGATATA CCGGCGAAAA CGTGACTCAA AATACGCGAA CGATTGCATC GGTTCCCTTA 
CAATTGCGTG GAAACGATTA TCCTGAATTA GTGGAAATAC GTGGCGAAGT GCTAATGCCG 
CGAGAGGGTT TTGCAAAATT TAATCGGGAG GCTGAAAAAC GTGGCGACAA AACCTTCGCC 
AATCCGCGTA ACGCAGCATC CGGTAGTTTG CGTCAGCTGG ACCCGCGGAT TACAGCCAAA 
CGCCCCCTTA TTTTTTACGG TTATTTAATC GGTTTACTTA AAGGAAAAGA CTTTCCGAAA 
AATCATTGTG ACGTATTGAA GTGGTTTAAG GATTGGGGGA TTCCAGTTAT TTCTGAAATA 
AAAGTTGTAG GTGGCATAGA GGGTTGTCTT GATTATTACG AACATTTAGT AAAAACTCGT 
GAAAAAATGC CTTTTGATAT CGATGGAATC GTTATAAAAG TAAATTCTCT GCAAGTTCAG 
GCTGAATTAG GATTCGTTTC GCGGGCGCCA CGATGGGCTA TCGCCTATAA ATTTCCAGCC 
CAGGAAAAAA TGACGGTAGT GAAAGCCATC GAGTTTCAAG TAGGACGCAC GGGCGCTGTT 
ACCCCAGTGG CTCGTTTAGA ACCGGTGTCG GTAAGTGGAG TGACGGTCAG TAATGCGACT 
TTGCACAATT TCGACGAACT TTATCGTAAA GACGTCCGCG TTGGGGATAC GGTTATTGTG 
CGTCGAGCGG GTGATGTAAT TCCCGAAGTG GTAGGACCGA TTTTAGCAAA GCGCCCCAAA 
AAGGCAAAAC TCATAAAAAT ACCGTCTCGC TGTCCTGTTT GCCACGCGGA AGTCATTAAA 
CCGGAGGGTG AAGCAGTAGC GCGCTGCGTG GGGGGATTAT ATTGCCGGGC TCAATTGCGT 
GAGAGTATAA AGCATTTTTC TTCCCGTCGG GCGTTGGATA TTGAGGGGTT AGGAGATAAA 
TTGGTAGAGC TTTTCATTCA GGAAAAATTA ATTAAAGACA TTACGGGAAT TTATCAACTT 
AAAAAATCAG CAATTACAGC TTTGCCGCGT ATGGGGGAAA AATCGGCAGA AAATTTATTA 
ACAGCAATTG AGAAAAGTAA AAAAACAACC TTGCCGCGTT TTTTGTATGC ACTGGGAATT 
CGCGGCGTTG GTGATACTAC CGCTCGAACG CTAGCGCGTC ATTTTCACGA ACTTGACCTT 
TTAATGAAAG CATCAATTGA AACCTTACAG GAAATTCGCG ATATCGGCCC CGTAGCGGCA 
GAAAATATTC ATGCTTTTTT CCATCAAAAA AATAATGCGG AATTAATTAA TAAATTAATT 
CATTTAGGCG TGCATTGGCC GCAAGAGAAA GCAGTGGTGA AATCGGAAAT TGCTGGTAAG 
ACATTCGTAC TTACCGGTGC TTTGAAATCA TTAACTCGCG AGGAAGCGGA AGAAAAAATC 
GAACGATCAG GAGGGAAGGC GACCAGCAGC GTATCGAAGA ATACGGATTA TGTGATCGTG 
GGTGAAAACC CGGGTAGCAA ATACGAAAAG GCAAAAGCAT TGGGAATTTC GCTTATTGAT 
GAAGAAGCCT TCTTGAAATT ACTGAAATCG TAA 

 

Protein sequence

MEVPAKIQKR IERLRHEIND HNYRYYVLSQ PTIPDSVYDE LFHELEKLEK KYPETITPSS 
PTQRVGAEPL KVFEPVHHEI PMLSLDNVFD EKGLRAFDKR IRQRLKLDKP FEYVCEPKMD 
GVALSLLYEN GELIRAATRG DGYTGENVTQ NTRTIASVPL QLRGNDYPEL VEIRGEVLMP 
REGFAKFNRE AEKRGDKTFA NPRNAASGSL RQLDPRITAK RPLIFYGYLI GLLKGKDFPK 
NHCDVLKWFK DWGIPVISEI KVVGGIEGCL DYYEHLVKTR EKMPFDIDGI VIKVNSLQVQ 
AELGFVSRAP RWAIAYKFPA QEKMTVVKAI EFQVGRTGAV TPVARLEPVS VSGVTVSNAT 
LHNFDELYRK DVRVGDTVIV RRAGDVIPEV VGPILAKRPK KAKLIKIPSR CPVCHAEVIK 
PEGEAVARCV GGLYCRAQLR ESIKHFSSRR ALDIEGLGDK LVELFIQEKL IKDITGIYQL 
KKSAITALPR MGEKSAENLL TAIEKSKKTT LPRFLYALGI RGVGDTTART LARHFHELDL 
LMKASIETLQ EIRDIGPVAA ENIHAFFHQK NNAELINKLI HLGVHWPQEK AVVKSEIAGK 
TFVLTGALKS LTREEAEEKI ERSGGKATSS VSKNTDYVIV GENPGSKYEK AKALGISLID 
EEAFLKLLKS