Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | COXBURSA331_A0441 |
Symbol | thiDE |
ID | 5793330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii RSA 331 |
Kingdom | Bacteria |
Replicon accession | NC_010117 |
Strand | + |
Start bp | 376752 |
End bp | 378191 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641329962 |
Product | thiamine-phosphate pyrophosphorylase/thiamine-phosphate pyrophosphorylase |
Protein accession | YP_001596281 |
Protein GI | 161830055 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase [TIGR00693] thiamine-phosphate pyrophosphorylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00801461 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCAAA AATCGATTGT TTGGTCAATT GGCGGTTCAG ACTGTTCCGG CGGTGCAGGC TGTCAGGCGG ATATATTGAC GTGTCGTGAT TTTAATGTGC ACGCGGCAAG TATTATTACG ACAATAACCG CACAAAACGC CGAGCAAGTT TTAAAAATAA ACTATTGCGA TTCCGATTTG ATCCAAAAAC AAATTCAGGC TCTTAAAGAA ACGCTTCCTC CAACAGTGAT TAAATTAGGA TTATTAGGAA CAAAAGAAAT CGTTACTGCG GTTGCTTCCT ATCTCAAAAA TTACAGCGGT AAGGTTGTCT GTGATCCCGT TTTAAATTCA ACATCCGGCG TATTATTGCA TGCGTCAGAT TATCTCGATT TGTTAAAGAA ACTCCTTTTT CCTCATGTGG ATTTATTAAC CCCGAATATT CCTGAAGCTG AAATTTTAAT CCAAAATAAA ATTCATACCT TTTCCGATAT AATTTCTGCC GCGCATCAAT TATTAAAATG CGGAGTCAGT GCCGTGTTAT TAAAAGGCGG TCACTTAATT GGTTCAAAGG CGTGTGATTT TTTCACGGAT GGTAAGTGTG AGTTTTGGTT AGCGCATACA AAAATACCCA AAACACGGGT GCGTGGGACG GGCTGCGCGT TAAGCTCAGC AATCAGTAGC GCGATAGCTT TAGGTTATTC ACTAAAAGAC GCGATAGTAG TAGCAAAAAT GTATGTTCAG CAGGGTATTC GTCAAAATTT TAAAGTCAAT ACTCAGGAAT TAATGGGGCG TCAAGGATTT CCACGGCGAT CGATAGACCT CCCGTGGGTA ACCAAAAATG CTAATTTTAA ACGAAAAAGC TTTCCTCTTT GTAACTCATT CGGTTTTTAT CCGATTGTTG ACAGCGTTGA ATGGGTGGAG CGATTGTTAT CGTACGGTAT TCGAACTATT CAATTACGAA TCAAAAACGC TTCCCCTCAA AAAATTAAAA AAGCGGTGAT CGAGAGTGTG GCCTTAGCAC GTCATTACCA GGCAAAATTG TTTATCAATG ATTATTGGAA ACTGGCCATT GAGGCTGGTG CTTATGGTGT TCATTTAGGA CAAGAAGATT TAGAAACCGC GGATCTTTCC GCCATTCGGG CGGCGAATTT GCGGTTAGGC ATTAGCACGC ATACGTTGTA TGAACTTTCA CGAGCGCATG CGATCCAACC TTCTTACGTG GCTTTTGGAC CGATTTATGA AACTTATTCT AAGCCGATGC CTTATTCTGC GCGTGGTTTG GAGTGGCTGC GTTATTGGTG TGAAATTTCC CCTTATCCGG TAGTGGCTAT TGGCGGTATT AATTTGAATC GATTGGAGAG CGTTTTAAAT GCAGGTGCGG TGAATGTAGC GGTTATTTCA GCCGTGACAA AAAGCAAAAC GCCGCAAAAA ACAGTAAGGG CCTTTTTAAA TCGAATATAG
|
Protein sequence | MNQKSIVWSI GGSDCSGGAG CQADILTCRD FNVHAASIIT TITAQNAEQV LKINYCDSDL IQKQIQALKE TLPPTVIKLG LLGTKEIVTA VASYLKNYSG KVVCDPVLNS TSGVLLHASD YLDLLKKLLF PHVDLLTPNI PEAEILIQNK IHTFSDIISA AHQLLKCGVS AVLLKGGHLI GSKACDFFTD GKCEFWLAHT KIPKTRVRGT GCALSSAISS AIALGYSLKD AIVVAKMYVQ QGIRQNFKVN TQELMGRQGF PRRSIDLPWV TKNANFKRKS FPLCNSFGFY PIVDSVEWVE RLLSYGIRTI QLRIKNASPQ KIKKAVIESV ALARHYQAKL FINDYWKLAI EAGAYGVHLG QEDLETADLS AIRAANLRLG ISTHTLYELS RAHAIQPSYV AFGPIYETYS KPMPYSARGL EWLRYWCEIS PYPVVAIGGI NLNRLESVLN AGAVNVAVIS AVTKSKTPQK TVRAFLNRI
|
| |