| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_5730 |
|---|
| Symbol | |
|---|
| ID | 5770490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010087 |
|---|
| Strand | - |
|---|
| Start bp | 434853 |
|---|
| End bp | 437459 |
|---|
| Gene Length | 2607 bp |
|---|
| Protein Length | 868 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641320020 |
|---|
| Product | type VI secretion system Vgr family protein |
|---|
| Protein accession | YP_001585686 |
|---|
| Protein GI | 161522757 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0627617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCGC TTGAACTGAT GCGAGTCATT CGAGGCGGCC TGATTCAGCA GGACCGCCTG
CTTCGGCTGG ATACGGCGGT GGGAAATGAC GTTTTGCTGC CCCATCAAAT GATTGGCGAA
TCGCGGCTGG GGCGGGACTT TGAATTTGTC GTCGACGTCG TCACGACAAC ACCGAACGTC
GAGCTCAAGA ATCTGATCGC GCAGCCGGCT ACGCTGTGGA TCCAGCAGCC CGGCGCAGTG
TATGCGCCGC ATAATGGCTA CGTACATACG GCGAGACGGC TTGGTGCCGA CGGAGGGCTG
ACGTTCCACC AAATATCCAT CGCCTCATGG ATGCATTTCC TGCGCTTCCG CCGTGATCAG
AGAATTTGGC AGGACAAGCC AGTCGACACG ATCGTCGCCG ACGTTTTTAA TGCGCATCCG
CAGGCCCGCG GGTTCTTTGA GTTTCACCTG TCCCGTGTGT TGCCGTCCCT TTCGTTCTGT
CGTCAGGACG AGACCGATTG GAACTTCGTC CATCGGCTGC TGGAGTCGGA GGGGCTCTAC
GGCTATTGGA AACATGACGC CGACGGCAGA GCGCACCGGC TCGTCATCAC CGACCGGCTC
GCAGCACTCG AAGAAGCGTT GCCGGTCACG TTTTCCCGCT CCGGAACAAC CGTCGCGTCA
GATGCCCTCA GGCAATGGAG CGCAACGCGG ACACTGCAGA GCACGTCGCT GACCACCCGA
ACGTTCGACT ATAAGAGTCC GGCGAGTGCC GTCAATGCGA AGGGAACCTC GATGCCCACT
ATGCCTAACC AGGGTGATCT ACCGGATCAG GCCGAGATCT ACGAGTACAC CGGTGCCTAC
ACCTTCTTGA CGCAGGAGCG GGGCGACGCA CTCTCGAAGA CTCGCCTCGA GGAATGGGAG
TCACGGTCGA AGCGTTTTTT CGGTATCGGC GGTTGGCGCG CAGCCGACGC AGGCAAACGT
TTCACATTGA ATGGCCATCC GGATCACGAC TGCGACTCGC CTGAGCAGCG CGAATTCGTA
GCAATCGGCG TGCGCTGGAT CGTTCGGAAC AATCTGCCGA TCGCTGCATC AGCGGCGAGG
ATGCCCCATA GTCTGGACAA ACCAATCGCG GAATCCGGGA TCGACGACTT GGACGTTGCT
GGGTACGTCT CGTCATATGC CGATGGCTCC ATCGGTGCCT ACCAAGTCGA GGTCGAAGCA
CAACGGACCA CGATACCGTT CCGGTCTCCA TTCGAGCACG TTAAGCCGCA GACGCATCTC
GAGACCGCGA TCGTCGTCGG GCCGCAAAAC GAAGAGGTCT ACACGGACGA GTTGAATCGC
ATCAAAGTCC GCTTCGTTTG GGATCGCATC AACCCAGGAA ACGAGGGTGC TTCGTGTTGG
GTGCGCGTCG TGCAGTCCGA CACCGGAAAT GGCTACGGTG CCGTACATCC GCCGAGGGTC
GGCGAGGAAG TCTTGATCGA CTACGTCGGC GGGGACTGTG ACCGCCCGAT CGCCATCGCG
CGCGTGTACA ACGGCGCGAC GAAGCCCCAG TGGCACACGC ACGGTCTCTT ATCAGGCTAT
CGCTCGAAGG AATTCGCCGG TGCGGGATAT AACCAGATGG TAATGGACGA CTCGACCGGC
CAAAACCGCC TGCAGTTGTT CAGCAGCCAG GGTAATTCCG CACTCCATCT CGGCTACCTG
ATCCAGCAGA CCGGCAACGT ACGGGGTACC TATCTTGGGA GCGGATTCGA CCTGCGTACC
GACAACTACG GCGCCGTTCG CGCGAATCGC GGGTTGTACG TCACCACGTA TCCGAATGCG
GCCGACAGCC AGCCGCTCGA CGCGCGTGAC ACGCAACAGC AGCTGGTGCG CGCCGAGAGC
TTGCTTGAAT CGTTGTCTGA CGTGGGCACT GCACACAACG CCGAGAGCCT ACAGGCCGGA
TACGACGCGC TGAAGCAACT GACAGATGCG ACGCAGGAAT CGATAGCGGG ATCCGCATCC
GGCGGACGAA CTGCTGGTGG AGGCACCGGA GCCGCGAACG CCTTTAAAGA CCCGGTGATG
CTGTTCGGTA GCCCTGCAGG CATCGGATTC TCCACGAATG AAACCGTTCA TATGTCAGCG
GCTCAGCACG TCAACATCGT CAGTGGCCAG AGCACTCACT TCGCGATCGG GAAATCGCTG
ATCGCGAGCG TCGCCAATAA GCTGAGCATC TTCGTCCAGA GCGCCGGCAT GAAGCTGTTT
GCCGCCCGCG GCAAGATCGA AGTGCAGGCA CACTCGGACA ACATCGAGCT CACCGCGCAA
AAGACCGTCA AGGTGCTTTC GGCGACTGCA AATGTCGAAG TCGCCGCAGA TCAGGAGGTC
TTCCTCACGT CCGGCGGCGC CTACATCCGT ATCGCGAACG GCGACATCCA GATTCATGCG
CCGGGGAAGA TCGACATCAA GGGAGCGACG CATAGCCTGA ACGGGCCCAC TGCGCAGGGT
TACGTGCTCC CAGGGCTGCC CCATGCGGGC GACGTTCCGC GATATCACGA ACAGTTCCAC
CTAGTCGACG AGGACGGCAA GACGGTATTG CCGCACACGC GCTACGAGAT CGAAAGTGAA
TCGGATTGTG CAACCTCTTT TCTGTAA
|
|---|
| Protein sequence | MDALELMRVI RGGLIQQDRL LRLDTAVGND VLLPHQMIGE SRLGRDFEFV VDVVTTTPNV
ELKNLIAQPA TLWIQQPGAV YAPHNGYVHT ARRLGADGGL TFHQISIASW MHFLRFRRDQ
RIWQDKPVDT IVADVFNAHP QARGFFEFHL SRVLPSLSFC RQDETDWNFV HRLLESEGLY
GYWKHDADGR AHRLVITDRL AALEEALPVT FSRSGTTVAS DALRQWSATR TLQSTSLTTR
TFDYKSPASA VNAKGTSMPT MPNQGDLPDQ AEIYEYTGAY TFLTQERGDA LSKTRLEEWE
SRSKRFFGIG GWRAADAGKR FTLNGHPDHD CDSPEQREFV AIGVRWIVRN NLPIAASAAR
MPHSLDKPIA ESGIDDLDVA GYVSSYADGS IGAYQVEVEA QRTTIPFRSP FEHVKPQTHL
ETAIVVGPQN EEVYTDELNR IKVRFVWDRI NPGNEGASCW VRVVQSDTGN GYGAVHPPRV
GEEVLIDYVG GDCDRPIAIA RVYNGATKPQ WHTHGLLSGY RSKEFAGAGY NQMVMDDSTG
QNRLQLFSSQ GNSALHLGYL IQQTGNVRGT YLGSGFDLRT DNYGAVRANR GLYVTTYPNA
ADSQPLDARD TQQQLVRAES LLESLSDVGT AHNAESLQAG YDALKQLTDA TQESIAGSAS
GGRTAGGGTG AANAFKDPVM LFGSPAGIGF STNETVHMSA AQHVNIVSGQ STHFAIGKSL
IASVANKLSI FVQSAGMKLF AARGKIEVQA HSDNIELTAQ KTVKVLSATA NVEVAADQEV
FLTSGGAYIR IANGDIQIHA PGKIDIKGAT HSLNGPTAQG YVLPGLPHAG DVPRYHEQFH
LVDEDGKTVL PHTRYEIESE SDCATSFL
|
|---|
| |