| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_5609 |
|---|
| Symbol | |
|---|
| ID | 5770703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010087 |
|---|
| Strand | + |
|---|
| Start bp | 316575 |
|---|
| End bp | 319052 |
|---|
| Gene Length | 2478 bp |
|---|
| Protein Length | 825 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641319905 |
|---|
| Product | type IV secretory pathway VirB4 components-like protein |
|---|
| Protein accession | YP_001585571 |
|---|
| Protein GI | 161522642 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
|---|
| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.931017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCA ACCCGAAGCG TCGAGCGGTT CAGGAAATCG CCCCGTGGGC GACGATGGTG
ACGCCCGAAA TTATTCTGGA CAAGGACGGG TCATTGCTGA CCCTGTACTC GTTCGAGGGC
GTGGACGCCG ACAGCCCCAA TTCCGACGAA ATCTCGGCCG CCCGAGACAA TCTCGACCAT
GCTTGCAAAA ATTTCGACCA CCGGATCACC GCCTGGTGGC GCGTATCGCA CCGCCGAGTA
AGGGGAGAAA TCGGCGGCAA GTTCGCGTCG GAAATGGATC GGCACGTCGA TGCGATCAAC
CAGAAGAGTA TCGGGAGCGG AAAGTACTTC CGCAATACTC ACTCTCTCGC GCTCGCATAT
ACGCCTGAAA CCGGCATCAA CAAGCTCTTC GAAAAAGTCG CGTACCACAT GACGGTGGGC
GGAAAATCGG TCCCGATCGC GTTGCTCGAG ACCGTCAAAG ATATGGTCCT TGCGCGTAGT
GCGTTCGTGT TCGACATGGA ACGCATCACG TCGGATATCA AGCGCTTCGA AGGCATCCTG
GACGCGTTCA AAGGCGGCGT AGCGCGCCTC AAAATGAAGC GGCTCCAGCT GCAGAGCGCC
TTGGCGTTCC TTCACCAGAC CGCCAATCCG TCGGTTCCCC CGCGGCGCGT GCGGTATCCC
GTGACGATGC TCGACACCCA TCTGACCGAA ACCTTCGTGA CGTACGGCGC CGAGCACATC
ATGTTCGAGT CCGCCTATGG GACACGGTAC GCAAAGATCA TCTCGGTGAA AGAGTGGATG
GGCTTCCAGG AGGCCGCACT TGACGTCCTG ACTGACGTCG ACGCGGAGCT AGACGTGTGC
GTCATGTTTC GCTTCCTCTC GACCAGCAAG GCACAGGCGT TCATCGAGAA GATGCGCAAG
TTCTATAAGG TCGCTGCGTT CAGTCCAATG AAGATCCTGA AGGGGTTCTT CTCGAAGGAC
GAGAAGAAGG AAAACATGGA GAACGAGAAG GGGCGCGAGA TCCTGGCAGA GGAGGCCGAA
AACGCGCTCG CTCGCCTGAT CGCTGATGGC CAGCAGTATG GCTTCGTGAA CATCTCGGTA
GTCGTATATG GAGACACGGT CACCGAGTGT GACGACAACG CGCGGGAGAT TGTCGGCCGC
ATCGGCAACG CTGGATTCGG TGTACTGGTC GAGAAGCGCA ACTTGCCGGC AGCGTGGGCA
TCGACGCTCC CCGGGCGCTG GGATCAACAA AAGCGCCTGC AGTTCGTCGA GACGCCAGTA
GTCTCGGACA TCGCGCCGGT GCGCGGCGTT GCGGAAGGCA GCGACGTTAA TCCATGGCTC
ACGCAGCAGC TTGGCGAGAG AATCGGCCCT TTGACGCTTC TCCCGACCCG GCACCGAACG
CTGCAGCGGG TCTCGTTGCA CGATCCGAGT GGAAAGTCGC ACGCGCTGAT CGTCGGTCCG
ATCGGTGCCG GCAAGACGAT CTTTCTCAAC TTTCTCGTTT CCCAAACTGG ACGCTTCCGG
CCGCGCCGCA TCAAGTTCGA CAAGAACCGT TCAACGCGCA TTCCGACCGT GTTTGCCAAT
GGCAAGTTCG TCGACGTCAC CGGCAAGTTT GCAGCTGCGA CGCAGGTCAA CCCGCTGTCT
CTGTTGGCCG ATCCTCGGCA CTACACCTAC GTGTCGGGGT GGGTGCAGAT GGCAATCGAG
GGCGACGGTG AGGATTTCCG GTGCACCCCG CAACAGGAGC GGACGATCTA CGAACGCGTT
GTCACGCTCG CGCAGGGCTA TGGTCCCGAG TACTGGACGC TCTCTTTCCT GGCCCCGCTA
CTGCCTGCCG AGCTACGGGA CCGCTTGCAG ATCTGGACGA AAGGTGAAAA GAACGGTCGG
TTCTTCGACC ACGTCGAGGA CGCGTTCTCG CTGTCTGACG ATCTGGCAAT CGAGATGGGG
GAATTGTTCG AAAGCTACCC GGTCGCTGCG GCGCTGTTTA TGGACTACGC GTTCTATCGG
ATCTCGCAGT GGCTCGACGG CAAGCGCGTC ACGATCATTG AGGTTGAGGA GTGCGGGTTC
TTCTTCCGGT ATCCGCGCTT CTATGCACGG CTGGAGATGT GGGTCGTGAC GATCCGGGGT
TTGAACGGGA CGCTAGTGAT GGCGACTCAG TCGCTGAGCC AGCTAGAACG GGTTCCGAAC
TTCGAGATCA TGAAGGAGAA CATCCCGAAC TTCTTCTTCC TCCCGAACCG GGACGCTCGG
AACAACAAAC GCCTCTATCG CGATGTGTTT GGCCTGACGG ACGACCAGAT CGACATGATC
AGCGATGGCG TTCCCAACCG CGACTATCTG TGGGTTACGC CGGATCACTC CCGGATGCTG
CAGGCGAAAT TCCCGAAGGA AGCACTCGCG ATATTGCGCG CCGATGGCGC GGCGCAGCGG
ACTCTCGACA AGCACCTCGC CAGCGGCTCG CCGACTTGGC GCGAAGACTA TCTCGCTGAA
ATGGCGACTC TCGACTGA
|
|---|
| Protein sequence | MSANPKRRAV QEIAPWATMV TPEIILDKDG SLLTLYSFEG VDADSPNSDE ISAARDNLDH
ACKNFDHRIT AWWRVSHRRV RGEIGGKFAS EMDRHVDAIN QKSIGSGKYF RNTHSLALAY
TPETGINKLF EKVAYHMTVG GKSVPIALLE TVKDMVLARS AFVFDMERIT SDIKRFEGIL
DAFKGGVARL KMKRLQLQSA LAFLHQTANP SVPPRRVRYP VTMLDTHLTE TFVTYGAEHI
MFESAYGTRY AKIISVKEWM GFQEAALDVL TDVDAELDVC VMFRFLSTSK AQAFIEKMRK
FYKVAAFSPM KILKGFFSKD EKKENMENEK GREILAEEAE NALARLIADG QQYGFVNISV
VVYGDTVTEC DDNAREIVGR IGNAGFGVLV EKRNLPAAWA STLPGRWDQQ KRLQFVETPV
VSDIAPVRGV AEGSDVNPWL TQQLGERIGP LTLLPTRHRT LQRVSLHDPS GKSHALIVGP
IGAGKTIFLN FLVSQTGRFR PRRIKFDKNR STRIPTVFAN GKFVDVTGKF AAATQVNPLS
LLADPRHYTY VSGWVQMAIE GDGEDFRCTP QQERTIYERV VTLAQGYGPE YWTLSFLAPL
LPAELRDRLQ IWTKGEKNGR FFDHVEDAFS LSDDLAIEMG ELFESYPVAA ALFMDYAFYR
ISQWLDGKRV TIIEVEECGF FFRYPRFYAR LEMWVVTIRG LNGTLVMATQ SLSQLERVPN
FEIMKENIPN FFFLPNRDAR NNKRLYRDVF GLTDDQIDMI SDGVPNRDYL WVTPDHSRML
QAKFPKEALA ILRADGAAQR TLDKHLASGS PTWREDYLAE MATLD
|
|---|
| |