| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_5476 |
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| Symbol | |
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| ID | 5770842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia multivorans ATCC 17616 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010087 |
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| Strand | + |
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| Start bp | 169384 |
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| End bp | 172167 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641319772 |
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| Product | DNA ligase D |
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| Protein accession | YP_001585438 |
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| Protein GI | 161522509 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00388357 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGGCA AGCTCGATCC GTATCGCCGC AAGCGTCATT TCGACGCGAC GCCCGAACCC
GAAGGCACGC GCCGCCGCCG CGCGCCGGCC GACGCGCAGC CGGCCGAGCG CGGCCGGCAT
CCGCTGCGCT ACGTGATCCA GGAGCATCAT GCGCGGCGCC TGCATTACGA TTTCCGGCTC
GAACTCGACG GCACGCTGAA GTCGTGGGCC GTGCCGAAAG GGCCGAGTTT CGATCCGTCG
GTCAAGCGGC TCGCGGTGCA CGTCGAGGAT CATCCGCTCG AATACGCGTC GTTCGAAGGC
GAGATTCCGG CAGGCCATTA CGGCGCGGGC TCGGTGATCG TCTGGGACGA GGGCACGTGG
ACGCCCGAGG GCGGGCTCGC GAAGGCGCGC GAAGGCTATC GCGCCGGCAA GCTGAAATTC
CGGCTCGACG GCGAGAAGCT GCACGGCGGC TGGGCGCTCG TGCGTAGCGG CCGCCAGGAA
GGGCGGCAGG AGCAGTGGCT GCTGATCAAG GAGCGCGACG ACGACGCGCG CAGCGCCGAG
GCATACGACG TCGTCGCGCA GCAGCCCGGC AGCGTGCACG ACGGCGCCAC GCGCGGGCAT
GCGACGAACG GGCATGCGCG GGCGCGCCGA CGCGGCGAGA AGGCGGCCGG CAAGGAGCCC
GACGCCGAGG CGGACGCCGA CACCGACGCC GACGCGCCAC GCGCCCGCGC GACGAAAGCG
AAACGGCCGC CTGCACTGTC GCGCGTCGAA GGCGCGGTGC GTGCGCCGCT GCCGGAGCGC
ATCGCGCCGC AACTCGCGAC GCTCGTCGAT GCGCCGCCCG CGCACGGCGA CTGGCGCTAC
GAACTGAAGT TCGACGGCTA CCGGATGCTC GCGCGTATCG CGGGCAAGGG CGCGCGGCGG
CGCGTGACGC TGATGACGCG CGAGGGCCGC GACTGGACGC CGAAGCTGCG CGCGCTGCGC
GATGCGCTCG CGGCACTCGA GGTCGACGAT GCATGGCTCG ACGGCGAAGC GGTCGTGCTC
GGCGAGAACG GGCTGCCCGA TTTCCAGCTG CTGCAGAACG CGCTCGGTTC CGGGCAGTCG
GATGCGGTCA CGCTGTTCGT GTTCGATCTG CCCTATCTGA ACGGCTATGA CCTGCGCGAT
GCGCCGCTGA CGGCACGCCG CGCGCAACTC GAACCGCTGT TCGACGCCGC CGATCCGGCG
CGCCTGCGTT TTTCGCCGGA TCTCGGCAGC GATGCGGCCG GACTGATCGC CAACGCGTGC
GACACGGGCC TCGAAGGGCT GATCGGCAAG CGCGCGGATG CACGCTACCG CGCGGGACGC
TCGCCGGCCT GGATCAAGCT CAAATGCCGG CGCAGGCAGG AGTTCGTGAT CGGCGGCTAT
ACGGAGCCGA CCGGTAGCCG CCACGGCTTC GGCGCGCTGC TGCTCGGCGT GCACGAGCCG
GCGCCGAACG GCAAGCGCAC GCGCGGCGCG TCGCCGCTGC GCTACGTCGG CCGGGTCGGC
ACCGGCTTCG ACACGCGGAT GCTCGACAAG CTCGCGCCGC TGCTGCGCGA GCACGAACGC
GCGTCGTCGC CGTTCGATCC GCCGCCGCAA GGGTGGTCGC GCACGCGCGT CCACTGGGTC
GAGCCGACGC TCGTCGCCGA ATGCGAATTC GCGGAATGGA CCGGCGACGG CATCGTGCGG
CAGGCCGCGT TCGTGGCGCT GCGCGAGGAC AAGCCGGCGT CGCAGATCGT CAGGGAAGTC
GCACGCCACC CCACCACGGA GAACACGATG GACGAGCGCA CGAGCTCATC CGCGCGGCGC
GGCCGCGCCG CGGCCGACAC GCATGACGGC GGGCAAGATC GCGCGCAACA CCGCGCGCAG
GAACGCGCGC CCGCCGCACG CGGCAAGTCG GCGCCCGATC AGGTCGGCCA GGTCCGCATC
ACGCATCCGG AGCGCGTGCT CGATCGCGAG AGCGGCACGC GCAAGATCGA TCTCGCGCAC
TACTGGGAAC GCGTCGCGCC GTGGGCGTTG CCCGATCTCG CGGGCCGCCC GGTGTCGCTC
GTGCGTGCGC CGCAGGACAT CGGCGGCGAG CTGTTTTTCC AGAAGCACGC GGAGCGCCGC
GAGATTCCGT TCGTCACGCA GCATCCGGGA CTCGACCCCG GACACGGTCC GCTACTGTCG
ATCGACAGCG TCGATGCGCT GATCGGCGCC GCGCAGATGG GCACGATCGA GCTGCATACG
TGGAACGCGC ACGCGTCGAA CATCGAGCGG CCGGACCGGA TCGTGTTCGA CCTCGATCCC
GATCCGGCGC TGCCGTGGCG CACGATGATC GAGGCCGCGC AGCTCGTGCG CGGGCTGCTC
GACGAGCTGG GCCTCGTGTC GTTCTGCAAG ACGAGCGGCG GCAAGGGGCT GCACGTGGTC
GTGCCGATCA CGCGGCATTC GGGCTGGGAC GAGATGAAGG ACTTCTCGCG CGCAGTCGCG
CAGCACATCG CGGGCGCGCT GCCCGACCGC TTCACGGCGA CGATGGGGCC GCGTCACCGG
CGCGGCAAGA TTTTCATCGA CTATCTGCGC AACGGCCGCG GCGCGAGCAC GATCGCCGCG
TATTCGGTGC GTGCGCGGCC CGGCATGGGC GTGTCGGTGC CGATCGACTG GGACGAAGTG
CCGGCCACGA CGGGCGGCGC GCAGTGGACG ATCGACACCG TGCACGAACG GCTCGACGCG
CTCGAGCGCG ATCCGTGGGA AGCGTACGCG GACACGCGCC AGCGCATCAC GGCCGCGATG
CGCACGCGCC TCGCCGCGCG CTGA
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| Protein sequence | MAGKLDPYRR KRHFDATPEP EGTRRRRAPA DAQPAERGRH PLRYVIQEHH ARRLHYDFRL
ELDGTLKSWA VPKGPSFDPS VKRLAVHVED HPLEYASFEG EIPAGHYGAG SVIVWDEGTW
TPEGGLAKAR EGYRAGKLKF RLDGEKLHGG WALVRSGRQE GRQEQWLLIK ERDDDARSAE
AYDVVAQQPG SVHDGATRGH ATNGHARARR RGEKAAGKEP DAEADADTDA DAPRARATKA
KRPPALSRVE GAVRAPLPER IAPQLATLVD APPAHGDWRY ELKFDGYRML ARIAGKGARR
RVTLMTREGR DWTPKLRALR DALAALEVDD AWLDGEAVVL GENGLPDFQL LQNALGSGQS
DAVTLFVFDL PYLNGYDLRD APLTARRAQL EPLFDAADPA RLRFSPDLGS DAAGLIANAC
DTGLEGLIGK RADARYRAGR SPAWIKLKCR RRQEFVIGGY TEPTGSRHGF GALLLGVHEP
APNGKRTRGA SPLRYVGRVG TGFDTRMLDK LAPLLREHER ASSPFDPPPQ GWSRTRVHWV
EPTLVAECEF AEWTGDGIVR QAAFVALRED KPASQIVREV ARHPTTENTM DERTSSSARR
GRAAADTHDG GQDRAQHRAQ ERAPAARGKS APDQVGQVRI THPERVLDRE SGTRKIDLAH
YWERVAPWAL PDLAGRPVSL VRAPQDIGGE LFFQKHAERR EIPFVTQHPG LDPGHGPLLS
IDSVDALIGA AQMGTIELHT WNAHASNIER PDRIVFDLDP DPALPWRTMI EAAQLVRGLL
DELGLVSFCK TSGGKGLHVV VPITRHSGWD EMKDFSRAVA QHIAGALPDR FTATMGPRHR
RGKIFIDYLR NGRGASTIAA YSVRARPGMG VSVPIDWDEV PATTGGAQWT IDTVHERLDA
LERDPWEAYA DTRQRITAAM RTRLAAR
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