Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmul_5472 |
Symbol | |
ID | 5771074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia multivorans ATCC 17616 |
Kingdom | Bacteria |
Replicon accession | NC_010087 |
Strand | + |
Start bp | 165869 |
End bp | 167296 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641319768 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_001585434 |
Protein GI | 161522505 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00130261 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGTCA CGCTTGCGCT CCAGATGCGA CAGCATCTGG CACTTACGCC GAGGCTCCAG CAGTCGCTGC GCCTGCTGCA GTTGTCTTCG CTCGAATTCC AGCAGGAATT GCGGCAGGCG CTCGACACGA ACCCTTTTCT TGAAGACGGC CAGGGCGACG ACGAGGTCGC CGCGCCGGAC CCGGCGGCCG AAGCCGCCGC GCCCGAGGCC GCGCCCGAGC GCGACGAGGT GCGCCCGGTC GACGGCGAGC TGTCGTACAC GGCCGCGCCC GCGCCGCGCG GCGGCAGCCG GCAGGGCGAA GACGGCGGCG ACCTGTCGCC CGGCGAATGG ATGGCCGCCG AGCCGTCGCT GCATCAGCAC CTGCACGAGG CGCTGCGGCT CTATCCGCTG AACCGGCGCG ATCGCGAAGC GGCGCGCCTC GTGATCGACG CGCTCGACGA CGACGGCTAC CTGCGTCAGG AGCCCGGCGA CCTGCTCGGC GCGGCCGATC CGGCGCTGCT GCTGTCCGAG CGCGATCTGT CGGTCGCGCT GCGGCTCGTG CAGATGCTCG ACCGGCCCGG CATCGCCGCG CGCTCGCTGT CCGAGTGCCT GCTGCTGCAG CTCGACGCGA TTCCGGCCGG CACGCCGGCG CTGCCCGAGG CGAAGGCGAT CGCGCGCGAA CATCTCGAAC GCCTCGCCCG CCGCGAGACC GCCGAGATCC AGCGGCGCAT CGGCTGCAAC CAGCAGACGC TGCAGGCCGC GTGCGCGCTC GTGCGCGGGC TCGACCCGCG TCCCGGCAAC CACTACGGCA GCACGCGCGG CGACTACGTC GTGCCCGACG TGATCGTGCG TCAGGTGCGC GACGAATGGG TCGTGACGAT CAACCCGGCC GTGCTGCCGC GCGCGCGGCT GCACGAGCGC TATGCGACGC TGTTCGCGCA GTCGAGCGGC GAGCGCGACT CGCCGCTCGG CCAGCAGCTG CAGGAAGCGC GCTGGCTGAT CCGCAACGTG CAGAAGCGCT TCGACACGAT CCAGCGCGTC GGCGAATGCA TCGTCGCGCG GCAGCGCGAC TTCTTCCGCT ACGGCGAGAT CGCGATGAAG CCGCTCGTGC TGCGCGACAT CGCGGAGGAG CTCGACCTGC ACGAATCGAC CGTGTCGCGC GCGACCGGCA ACAAGTACAT GGCGACGCCG CACGGCACGT TCGAGTTCAA GCATTTCTTC CCGCGCAAGC TGGAGGCGGC GGGCCGCGGC GTGTGCTCGG CATCGGCCGC GAAGGTGCTG ATCCGCGACA TGATCGCCGC GGAACGGCAC ACCGATCCGC TGTCGGACGT CGCGCTGACG CAGAACCTCG CCGGCCGCGG CATCCTTCTT GCGCGCCGGA CGGTGACCAA GTATCGGCAG GCGATGAAGA TTCCGCCGGC CGAGCTGCGC CGCCGCGACG CCGCATGA
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Protein sequence | MSVTLALQMR QHLALTPRLQ QSLRLLQLSS LEFQQELRQA LDTNPFLEDG QGDDEVAAPD PAAEAAAPEA APERDEVRPV DGELSYTAAP APRGGSRQGE DGGDLSPGEW MAAEPSLHQH LHEALRLYPL NRRDREAARL VIDALDDDGY LRQEPGDLLG AADPALLLSE RDLSVALRLV QMLDRPGIAA RSLSECLLLQ LDAIPAGTPA LPEAKAIARE HLERLARRET AEIQRRIGCN QQTLQAACAL VRGLDPRPGN HYGSTRGDYV VPDVIVRQVR DEWVVTINPA VLPRARLHER YATLFAQSSG ERDSPLGQQL QEARWLIRNV QKRFDTIQRV GECIVARQRD FFRYGEIAMK PLVLRDIAEE LDLHESTVSR ATGNKYMATP HGTFEFKHFF PRKLEAAGRG VCSASAAKVL IRDMIAAERH TDPLSDVALT QNLAGRGILL ARRTVTKYRQ AMKIPPAELR RRDAA
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