Gene Bmul_5472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBmul_5472 
Symbol 
ID5771074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia multivorans ATCC 17616 
KingdomBacteria 
Replicon accessionNC_010087 
Strand
Start bp165869 
End bp167296 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content71% 
IMG OID641319768 
ProductRNA polymerase factor sigma-54 
Protein accessionYP_001585434 
Protein GI161522505 
COG category[K] Transcription 
COG ID[COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 
TIGRFAM ID[TIGR02395] RNA polymerase sigma-54 factor 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00130261 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGTCA CGCTTGCGCT CCAGATGCGA CAGCATCTGG CACTTACGCC GAGGCTCCAG 
CAGTCGCTGC GCCTGCTGCA GTTGTCTTCG CTCGAATTCC AGCAGGAATT GCGGCAGGCG
CTCGACACGA ACCCTTTTCT TGAAGACGGC CAGGGCGACG ACGAGGTCGC CGCGCCGGAC
CCGGCGGCCG AAGCCGCCGC GCCCGAGGCC GCGCCCGAGC GCGACGAGGT GCGCCCGGTC
GACGGCGAGC TGTCGTACAC GGCCGCGCCC GCGCCGCGCG GCGGCAGCCG GCAGGGCGAA
GACGGCGGCG ACCTGTCGCC CGGCGAATGG ATGGCCGCCG AGCCGTCGCT GCATCAGCAC
CTGCACGAGG CGCTGCGGCT CTATCCGCTG AACCGGCGCG ATCGCGAAGC GGCGCGCCTC
GTGATCGACG CGCTCGACGA CGACGGCTAC CTGCGTCAGG AGCCCGGCGA CCTGCTCGGC
GCGGCCGATC CGGCGCTGCT GCTGTCCGAG CGCGATCTGT CGGTCGCGCT GCGGCTCGTG
CAGATGCTCG ACCGGCCCGG CATCGCCGCG CGCTCGCTGT CCGAGTGCCT GCTGCTGCAG
CTCGACGCGA TTCCGGCCGG CACGCCGGCG CTGCCCGAGG CGAAGGCGAT CGCGCGCGAA
CATCTCGAAC GCCTCGCCCG CCGCGAGACC GCCGAGATCC AGCGGCGCAT CGGCTGCAAC
CAGCAGACGC TGCAGGCCGC GTGCGCGCTC GTGCGCGGGC TCGACCCGCG TCCCGGCAAC
CACTACGGCA GCACGCGCGG CGACTACGTC GTGCCCGACG TGATCGTGCG TCAGGTGCGC
GACGAATGGG TCGTGACGAT CAACCCGGCC GTGCTGCCGC GCGCGCGGCT GCACGAGCGC
TATGCGACGC TGTTCGCGCA GTCGAGCGGC GAGCGCGACT CGCCGCTCGG CCAGCAGCTG
CAGGAAGCGC GCTGGCTGAT CCGCAACGTG CAGAAGCGCT TCGACACGAT CCAGCGCGTC
GGCGAATGCA TCGTCGCGCG GCAGCGCGAC TTCTTCCGCT ACGGCGAGAT CGCGATGAAG
CCGCTCGTGC TGCGCGACAT CGCGGAGGAG CTCGACCTGC ACGAATCGAC CGTGTCGCGC
GCGACCGGCA ACAAGTACAT GGCGACGCCG CACGGCACGT TCGAGTTCAA GCATTTCTTC
CCGCGCAAGC TGGAGGCGGC GGGCCGCGGC GTGTGCTCGG CATCGGCCGC GAAGGTGCTG
ATCCGCGACA TGATCGCCGC GGAACGGCAC ACCGATCCGC TGTCGGACGT CGCGCTGACG
CAGAACCTCG CCGGCCGCGG CATCCTTCTT GCGCGCCGGA CGGTGACCAA GTATCGGCAG
GCGATGAAGA TTCCGCCGGC CGAGCTGCGC CGCCGCGACG CCGCATGA
 
Protein sequence
MSVTLALQMR QHLALTPRLQ QSLRLLQLSS LEFQQELRQA LDTNPFLEDG QGDDEVAAPD 
PAAEAAAPEA APERDEVRPV DGELSYTAAP APRGGSRQGE DGGDLSPGEW MAAEPSLHQH
LHEALRLYPL NRRDREAARL VIDALDDDGY LRQEPGDLLG AADPALLLSE RDLSVALRLV
QMLDRPGIAA RSLSECLLLQ LDAIPAGTPA LPEAKAIARE HLERLARRET AEIQRRIGCN
QQTLQAACAL VRGLDPRPGN HYGSTRGDYV VPDVIVRQVR DEWVVTINPA VLPRARLHER
YATLFAQSSG ERDSPLGQQL QEARWLIRNV QKRFDTIQRV GECIVARQRD FFRYGEIAMK
PLVLRDIAEE LDLHESTVSR ATGNKYMATP HGTFEFKHFF PRKLEAAGRG VCSASAAKVL
IRDMIAAERH TDPLSDVALT QNLAGRGILL ARRTVTKYRQ AMKIPPAELR RRDAA