| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_5212 |
|---|
| Symbol | |
|---|
| ID | 5769372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010086 |
|---|
| Strand | - |
|---|
| Start bp | 2362420 |
|---|
| End bp | 2364702 |
|---|
| Gene Length | 2283 bp |
|---|
| Protein Length | 760 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641319503 |
|---|
| Product | fimbrial biogenesis outer membrane usher protein |
|---|
| Protein accession | YP_001585174 |
|---|
| Protein GI | 161521747 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3188] P pilus assembly protein, porin PapC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGCCT TTCAAGCCCC GTTTCAATTA AACAAGCTGT GGCTGAGTGC ATTCCTGTTT
ATTTATTCGC ACTCGTACGC AGAAGTCAAG GTATCGTATG GCGTACCTGA AGGGTTCAGT
GCGGCTGAAA TGGACGATAG CGCAAACTAT GTCGCGACGT TCAAGGGCAG AACGCTTCCG
GGATTCATTC GCTATTCGGC AACCGCCGCA TCACTCGAAT TCGATGCGGA GAAATATGCG
GCGAACGGCA TCTCGCCGGA CGAGGTCGAC ACGATCCGCA GCGTCGTATC GCAGCTCGAC
TACAAACGCT GTCGCAACGG TTGCGACGTC GAAATCGCCG GCTACTACGT CACGATCGAC
AAGATGAAGC GTTCGATCTC GATCCGCGAT ACGCGCGAAG ACTATTTCGT ACCGGAAACC
GCGTTCGGGC TCGTCAACGA CCAGTCGGTC GACGTGCGCG CAGCGACGGA CAGCTATCGC
GCGTTCAACC TGAACGGCAC GACGTGGGTC GGCTTGCCCT CGCAGAGCTT CGGCTATCTG
AGCTGGTATG TGAACCACAC CGAGACGCGC GGCAACACCA TCGGCACGCA AGGCGTCTCG
TCGTACTACG TGCAGAAGAA TTTCGCCGGC ACGTATGTGC GTGCGGGCAA GCAGAACAGC
ATCGACTATG CGTCGGGGGC GGTCAGCACG CTGCTGTCGC CGGGTTTCGA CCAGTTCGTG
ACGGTCGGCA GCCAGCGCAA TCTCCAGGTC AATCGCAGCG TAGGCTCGCT GATCCTGTAT
GCGACGGCCG AAGGGAACTA CGAGTTCTAT CGCGGCGGGC GCCTGATCCT GAAGCGGCCC
GCCGCGCTCG GCCGCAACGA GATCAGCTTC GCGGATCTCC CCGGCGGCTA CTACCCGGTG
GAGGTGCGCC TCGTCGATCG CAGCGGCCAC GTGGTCAGCC AGGAAGTCCG CGAGATCAAC
AACGTCAACT TCGGCAGGGC CGCCGGCAAT GCGTGGCGCT TCACGGTCGG CAAGGAGATG
CGCGAGCAGG GTGGCTTCCT GATGGAAGCC GCGATGAGCC GCAATTTCCG CCAGTTCTAC
ATGAACGCGT CGACGCTGGC CGGTCATGGC GGAGACTGGG CGGCCGAAAT CAACGTCACG
CGGCCGACGA TGCTCGCCGA CATCGATCTG TCGCCGACGC TCGGCGTGCT GGGCGGCGAG
CGCGGTGCGG GCGGCTACAT GACACTGGCC GCGGCCCACG AAGTGCTCGG CAACGTGATG
GTCAGCCGGT ATCTGAACAA CGACGTGTCG CGGTTCTACA GGGGCACGTC GAGCACGAGC
GTCTCGTACA GCCGGAACAT TCGGCGCGCG ACGGCCAGCT ACAACTACCA GCGCTCACCG
TTCAACGAGA CGCAGCAGGC CGAAGTGCGC TGGAACTACC GGCCGAACGG TTTGTGGGCG
ACCTTTGCGC TCGGCGTGCA GAAGGGCAGC TTCGTGCGCG GCTCAGGCAG TGGCGACTAC
GGCGTCTATT TCAACATGAC GATGCAGCTC GACAGGACGC AGGCGAGCTT CAACGCTGCG
CATTCGGGCG GCCAGACGCA GTTGAGCGGC GACTACCGGA AGGATTTCCG GGACGGTTTC
GGCACGACCA CGCTGGGCGT GACGGGCAGC CGGGTTGGCA GCGACTATGG GATGAACGTG
TATGGCAGCC GTTCGGGCAC GCGCGGCGAT GCGTCGCTGA ACGTCGGCTA CAACGGCGAC
GCCGCGAACC TCGACTTCAA CTACCGGGGC ATGTTCGCAG CGAGCCCGGA AGGTATTGCA
TTCGGTCGCT ACGGCGGCAG CGGCAGCGCG ATGCTGCTGC GCACGCCGAA CATCGACGGG
ATGAATTACG GCTTCAACGT CGAAGGCAAT CCGGTCGGCG GCAACAGCAC CTATGCGGTG
CCGCTCAACG CATACAGCGA CGTGCCGTTC GCCCGCGTGC TGAGCAACAG CAGCAAACTC
GACATGAACA TCGAGGTGCC GGCGAACATC CTGCGCGCAC ATCCGGGCCA GGTGTATGCG
GCCAGCGCGA AGGTCGATAT CAACATGATC TACAGCGGAT TCCTGACCGA TCAGGACGGC
AAGCCGATCA GCGGGAAGAT CGCCGAGACC GGCGACACCG TCTACCGCAA CGGCTTGTTC
TCGATCGTCA GCAAGAGGAT GTTGTCGGAC CTGACGGTCG CCGGCGACGG TTATCAGTAC
ACGTGCAGCC TGAAGGATGC GAGCGGGTCT TACTACCGCT GCAGCGCGGG CGTCGCGCAG
TAA
|
|---|
| Protein sequence | MSAFQAPFQL NKLWLSAFLF IYSHSYAEVK VSYGVPEGFS AAEMDDSANY VATFKGRTLP
GFIRYSATAA SLEFDAEKYA ANGISPDEVD TIRSVVSQLD YKRCRNGCDV EIAGYYVTID
KMKRSISIRD TREDYFVPET AFGLVNDQSV DVRAATDSYR AFNLNGTTWV GLPSQSFGYL
SWYVNHTETR GNTIGTQGVS SYYVQKNFAG TYVRAGKQNS IDYASGAVST LLSPGFDQFV
TVGSQRNLQV NRSVGSLILY ATAEGNYEFY RGGRLILKRP AALGRNEISF ADLPGGYYPV
EVRLVDRSGH VVSQEVREIN NVNFGRAAGN AWRFTVGKEM REQGGFLMEA AMSRNFRQFY
MNASTLAGHG GDWAAEINVT RPTMLADIDL SPTLGVLGGE RGAGGYMTLA AAHEVLGNVM
VSRYLNNDVS RFYRGTSSTS VSYSRNIRRA TASYNYQRSP FNETQQAEVR WNYRPNGLWA
TFALGVQKGS FVRGSGSGDY GVYFNMTMQL DRTQASFNAA HSGGQTQLSG DYRKDFRDGF
GTTTLGVTGS RVGSDYGMNV YGSRSGTRGD ASLNVGYNGD AANLDFNYRG MFAASPEGIA
FGRYGGSGSA MLLRTPNIDG MNYGFNVEGN PVGGNSTYAV PLNAYSDVPF ARVLSNSSKL
DMNIEVPANI LRAHPGQVYA ASAKVDINMI YSGFLTDQDG KPISGKIAET GDTVYRNGLF
SIVSKRMLSD LTVAGDGYQY TCSLKDASGS YYRCSAGVAQ
|
|---|
| |