| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_4907 |
|---|
| Symbol | |
|---|
| ID | 5769682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010086 |
|---|
| Strand | + |
|---|
| Start bp | 2028427 |
|---|
| End bp | 2029860 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641319199 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001584870 |
|---|
| Protein GI | 161521443 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.113604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000355174 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCG CCACACCTGC CTTTCCCCGT ACACTCGCGC GCATCGTCGC GACCGTCAGC
GTCGGCTTCG TCGTCACGCA GCTCGACGTG ACGATCGTCA ATATCGCGCT CGCGCACATG
GCCGCCGCGC TGCATCTGTC GGTCGCCGGT TTGCAATGGG TCGTCGATGC GTACACGCTC
GCGTTCGCGG TCCTGATGCT GTCGGCCGGC GCGCTCGGCG ACCGCTTCGG CGCGCGTCGC
CTCTATGTCG CGGGCCTCGC GCTGTTCGCG CTCGCGTCGC TCGCATGCGG CGCAGCCGTG
GCGCCGGCGA TGCTGATCGC GGCGCGTGCC GTGCAAGGCG TCGGCGCGGC GGCCATGCTG
CCCAACTCGC TCGCGCTGCT GAACGATGCG TGCCGGCACG ATCCGGCGCT GCGTGCGCGC
GCGGTCGGCG CATGGACGGC GGCCGGTTCG GTGTCGATCG CGGCCGGTCC CGTGCTCGGC
GGCGCGCTGA TCGCCGCGTT CGGCTGGCGC AGCATCTTCC TCGTCAATCT GCCGCTCTGT
GCGGCCGGGC TCGCGGCCGC ATTCGCCTGG ACACCGGTCG ATCGTGCGGC CGCATCGCCT
GCGCCGCAGG CGCGTACGCT CGACGTACGC GGCCAGCTCG TCGCAATCGC GATGCTGACC
GCGCTCACCG GCGCGGTGAT CGAATGGCGG CCGCTGGGCC TCGCGCATCC GGTCGTCGCC
GGCGGCTTCG TGCTCGCGGT GCTCGCCGCC GCCGCGTTCA TCGCGATCGA ATCGCGCACC
GCGACGCCGA TGCTGCCGCT CGCGCTGTTC CGCCGCCGCA CGTTCAGCGC GGCCGTGCTG
TTCGGGATCT GCGTCAATCT CACGTATTAC GGCACCGTGT TCGTGATCGC GCTGTATCTG
CAGCGCGTGC GCGGCGAATC GGCGCTACAG GCGGGACTCG CGTTCCTGCC GCTGACGGGC
GGCTTCCTGC TCGCGAATCT CGCCAGCGGC CGCGCTGTCG CGCGCTACGG GCCGCGTGCG
CCGATGCTCG CCGGCGCGCT CGTCGCCGCG CTCGGCTACG GGTCGCTGCA CTTCGTCGAC
GGCTCGACGC CGTTGCCCGC GCTGCTCGTG CCGTTCGTGC TGATTCCGTC GGGGATGGGT
TTCGCGGTGC CGGCGATGAC GACCGCCGTA CTCGCCTCGG TCGAACCGGC GCGCGCCGGT
ATCGCGTCGG CCGTGCTCAA TACCGCGCGA CAGGCCGGCG GGGCGATCGG CGTTGCGGCG
TTCGGCGCGG TGGCCGGCAG CGGTGGCGCG GTGCCGGTGG TCGATGGGCT GCGCATCGAT
ACCGGCGTGT CGGTCGCGCT GCTGATCGCG GCTGCGCTGC TCGCCACGCG CGTGCGGCCC
GACGCGCATC GCGACGCGCA TGGCGGCCGC CGTCCGTTGC AGACGACGGA CTGA
|
|---|
| Protein sequence | MDTATPAFPR TLARIVATVS VGFVVTQLDV TIVNIALAHM AAALHLSVAG LQWVVDAYTL
AFAVLMLSAG ALGDRFGARR LYVAGLALFA LASLACGAAV APAMLIAARA VQGVGAAAML
PNSLALLNDA CRHDPALRAR AVGAWTAAGS VSIAAGPVLG GALIAAFGWR SIFLVNLPLC
AAGLAAAFAW TPVDRAAASP APQARTLDVR GQLVAIAMLT ALTGAVIEWR PLGLAHPVVA
GGFVLAVLAA AAFIAIESRT ATPMLPLALF RRRTFSAAVL FGICVNLTYY GTVFVIALYL
QRVRGESALQ AGLAFLPLTG GFLLANLASG RAVARYGPRA PMLAGALVAA LGYGSLHFVD
GSTPLPALLV PFVLIPSGMG FAVPAMTTAV LASVEPARAG IASAVLNTAR QAGGAIGVAA
FGAVAGSGGA VPVVDGLRID TGVSVALLIA AALLATRVRP DAHRDAHGGR RPLQTTD
|
|---|
| |