| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_4646 |
|---|
| Symbol | sdhA |
|---|
| ID | 5768940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010086 |
|---|
| Strand | - |
|---|
| Start bp | 1751064 |
|---|
| End bp | 1752839 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641318944 |
|---|
| Product | succinate dehydrogenase flavoprotein subunit |
|---|
| Protein accession | YP_001584616 |
|---|
| Protein GI | 161521189 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.303055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAA TCAAAACTTC CCTCCCGCGT CGCAAGTTCG ACGTCGTGAT CGTCGGCGCG
GGCGGCTCCG GCTTGCGCGC GGCGCTGCAA CTGTCGCGCG CGGGCCTGTC GGTCGGCGTG
CTGTCGAAGG TGTTCCCGAC CCGTTCGCAC ACGGTGGCCG CGCAGGGCGG CATCGGCGCG
TCGCTCGGCA ACATGAGCGA AGACAACTGG CACTTCCACT TCTACGACAC GATCAAGGGC
TCCGACTGGC TCGGCGACCA GGACGCGATC GAATTCATGT GCCGTGAGGC GCCGAACGTC
GTGTACGAGC TCGAGCACTT CGGCATGCCG TTCGACCGTA ACGCCGACGG CACGATCTAT
CAGCGTCCGT TCGGCGGCCA CACCGCGAAC TACGGCGAGA AGCCGGTCCA GCGCGCCTGC
GCGGCCGCCG ACCGTACCGG TCACGCGCTG CTGCACACGC TGTACCAGCA AAACGTCGAA
GCGAAGACGC AGTTCTTCGT CGAATGGATG GCGCTCGACC TGATCCGCGA CGCGGACGGC
GACGTGCTCG GCGTGACGGC GCTCGAAATG GAAACGGGCG ACGTCTACAT CATGGAAGGC
AAGACGACGC TGTTCGCGAC GGGCGGCGCA GGCCGGATCT TCGCGGCGTC GACCAACGCG
TTCATCAACA CCGGCGACGG CCTCGGCATG GCGGCGCGCG CAGGCGTGGC GCTGCAGGAC
ATGGAGTTCT GGCAGTTCCA CCCGACCGGC GTGGCCGGCG CGGGCGTGCT GATCACCGAA
GGCGTGCGCG GCGAAGGCGG CATTCTGCGC AACGCGAACG GCGAGCGCTT CATGGAGCGC
TACGCGCCGA CGCTGAAGGA TCTGGCGCCG CGCGATTTCG TGTCGCGTTC GATGGACCAG
GAAATCAAGG AAGGCCGCGG CGTCGGTCCG AACAAGGATC ACGTGCTGCT CGACCTGTCG
CACATCGGCG CCGAGACGAT CATGAAGCGT CTGCCGTCGA TCCGCGAGAT CGCGCTGAAG
TTCGCGAACG TCGACTGCAT CAAGGAGCCG ATCCCGGTCG TCCCGACGAT CCACTATCAG
ATGGGCGGCA TCCCGACCAA CATCCACGGT CAGGTCGTCG GCACGTCGCG CGATCACAAG
GAGCCGATCA ACGGCTTCTA CGCCGTGGGC GAATGCTCGT GCGTGTCGGT GCACGGCGCG
AACCGCCTCG GCACGAACTC GCTGCTGGAC CTCGTGGTGT TCGGCCGTGC GGCCGGCAAC
CACATCGTCG AGCAGGTCAA GAAGCAGAAG GAACACAAGC CGCTGCCGGC CGACGCGGGC
GAATTCTCGC TGGCGCGCCT GAACAAGCTC GACAAGTCGA GCTCAGGCGA GTACACGCAG
GACGTCGCGA ACGACATCCG CGCGACGATG CAGAAGCATG CAGGCGTGTT CCGCACCTCG
GCGCTGCTGA AGGAAGGCGT CGAACTGATG GACGGCCTCA AGCAGCGTGT CGAGCACATC
CATCTGAAGG ACAAGTCGAA GGTGTTCAAC ACCGCGCGCG TCGAAGCGCT CGAGCTGGAG
AACCTGATCG AAGTCGCCCG CGCGACGATG GTCTCGGCCG AGGCGCGCAA GGAAAGCCGT
GGCGCGCACG CGCACAGCGA CTACGAGCAC CGCGACGACG AGAACTGGCT GCGTCACACG
CTGTGGTACA GCGAAGGTGA CCGCCTCGAC TACAAGCCGG TTCAAATGCA GCCGCTGACG
GTCGAGTCCG TGCCGCCGAA GGCGCGTACG TTCTAA
|
|---|
| Protein sequence | MAAIKTSLPR RKFDVVIVGA GGSGLRAALQ LSRAGLSVGV LSKVFPTRSH TVAAQGGIGA
SLGNMSEDNW HFHFYDTIKG SDWLGDQDAI EFMCREAPNV VYELEHFGMP FDRNADGTIY
QRPFGGHTAN YGEKPVQRAC AAADRTGHAL LHTLYQQNVE AKTQFFVEWM ALDLIRDADG
DVLGVTALEM ETGDVYIMEG KTTLFATGGA GRIFAASTNA FINTGDGLGM AARAGVALQD
MEFWQFHPTG VAGAGVLITE GVRGEGGILR NANGERFMER YAPTLKDLAP RDFVSRSMDQ
EIKEGRGVGP NKDHVLLDLS HIGAETIMKR LPSIREIALK FANVDCIKEP IPVVPTIHYQ
MGGIPTNIHG QVVGTSRDHK EPINGFYAVG ECSCVSVHGA NRLGTNSLLD LVVFGRAAGN
HIVEQVKKQK EHKPLPADAG EFSLARLNKL DKSSSGEYTQ DVANDIRATM QKHAGVFRTS
ALLKEGVELM DGLKQRVEHI HLKDKSKVFN TARVEALELE NLIEVARATM VSAEARKESR
GAHAHSDYEH RDDENWLRHT LWYSEGDRLD YKPVQMQPLT VESVPPKART F
|
|---|
| |