| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_4198 |
|---|
| Symbol | |
|---|
| ID | 5769247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010086 |
|---|
| Strand | - |
|---|
| Start bp | 1226297 |
|---|
| End bp | 1227841 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641318499 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_001584171 |
|---|
| Protein GI | 161520744 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0953262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTCA GGGCACGTCT CCTGCACTCC GTTCTCGCCA CTCCCCCGTC CGGCAACCAC
TGCGTGACGG ACGCGCTGCG TCCGTCGATG CTCGTCACGC TGTTCGAGGA CGTGCGGCCG
ATGGCGCTGT CCGGCCTCGC AAGCGGCTTC GTCGCAGCCG TCGCGCTGCT TCGTCTGCAT
GAACTCTGGT GTGCGATCTG GCTCGTCCTC GACGTCGGGC TGCTCGCCGC GCGGCTCGCG
ATCGCGCGCG CCTACGTGGT CGAGCGCGAC GCCGGCCGCG ATCGCGCCGA ATACTGGGCG
ATGCGCTACG CGCCCGTGTC GCTGCTCGCC TGCTTCGTGC TCGGCCTCGG CGCGATGGGC
TGCGTCGATG CGGCCGACGT CGAGCTCGGC ACGCTCGCGG TGATGATCGC GGGCGGCGTG
TTCGGCGGCA TCGCGTCGCG CAATTCGGCG CTGCCGCGCC TCGCGATGAC GCAGGTCACG
CTCGGCGTGC TGCCGATCGG CGTCGGCGCG CTGCTCGCCG AGCGGCCGGG CGCGTGGCTG
CTGGTGCCGC CGCTCGCGAT CTATCTGGCC GCGATGCGCA CCGTCGTGCA ACGCCACTAC
CGCGTACTCG TCGCGCTGAT CGCGGCCCGC CAGCGCAATG CGGAACTCGT CGCGCGCTTC
GACGCCGCGC TCACCTACAT GCCGCACGGC CTCTGCATGA TCGACGGCGA CAGCCGCGTG
ATCGTCGCGA ACCGGCGCAC CGCGCAACTG TTCGGTTCGC CGCGCGACAT CATGCTCGAT
ACGCCGCTGC CGGACGTCGT CGCGGCGCTC GGCACCGATG CCGCGCAGCC CGACGCTGCC
GTCCTCGCGG CCCGCTGCGC GGACTGGCTC GCGCACGACG CGGCGCCGTT CGACATTACG
CTCGCGAGCG GCCGGCAGCT CGAACTGACG CGCCATCGCG TGCCGGACGG CAACGCGGTG
ATCATCGTCG AGGACGTGAC CGCGCGGCGT CTGACCGAAC AGCACATCCG CCACCTCGCA
CGGCACGATG CGCTGACGGG GCTGCCGAAC CGGCACGAGT TGCATGCGGA GCTCGAACGG
ATGCTGTCGC GGCCGCCGCG CCGGCCCGAC ACGGCGGTCG CGGTGATGTA TCTCGATCTC
GACGGCTTCA AGGCGATCAA CGATCGCTTC GGCCATCAGG CCGGCGACGA GCTGCTCATG
CAGGTCGCCG AACGCCTCGG CCGCGCGTTG CGCGACGGCG CGCTCGCGGC GCGCATCGGC
GGCGACGAGT TCGTCGTGGC CGTCGACGAT ACGACGATGG ACGCGTGCTC GCGCGTCGCC
GCGCAGCTCA TCGCGCAGAT CTCGGCGCCC TACACGCTGT CGATCGGCGA GACGGTGCGC
TTCGGCATCA GCATCGGCAT CGCACTCGAC GACGGGCACG GCACGCCCGA CGAGCTGATC
CGCCAGGCCG ACAGCGCGCT CTACGACGCG AAGTCGGCCG GCAAGGGCCG CTATCGGTTC
TATTCGAGCG GCAGCCGGCC CGTCGCGCCG GCCGCCGCAA ACTGA
|
|---|
| Protein sequence | MAVRARLLHS VLATPPSGNH CVTDALRPSM LVTLFEDVRP MALSGLASGF VAAVALLRLH
ELWCAIWLVL DVGLLAARLA IARAYVVERD AGRDRAEYWA MRYAPVSLLA CFVLGLGAMG
CVDAADVELG TLAVMIAGGV FGGIASRNSA LPRLAMTQVT LGVLPIGVGA LLAERPGAWL
LVPPLAIYLA AMRTVVQRHY RVLVALIAAR QRNAELVARF DAALTYMPHG LCMIDGDSRV
IVANRRTAQL FGSPRDIMLD TPLPDVVAAL GTDAAQPDAA VLAARCADWL AHDAAPFDIT
LASGRQLELT RHRVPDGNAV IIVEDVTARR LTEQHIRHLA RHDALTGLPN RHELHAELER
MLSRPPRRPD TAVAVMYLDL DGFKAINDRF GHQAGDELLM QVAERLGRAL RDGALAARIG
GDEFVVAVDD TTMDACSRVA AQLIAQISAP YTLSIGETVR FGISIGIALD DGHGTPDELI
RQADSALYDA KSAGKGRYRF YSSGSRPVAP AAAN
|
|---|
| |