| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_4158 |
|---|
| Symbol | |
|---|
| ID | 5769380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010086 |
|---|
| Strand | + |
|---|
| Start bp | 1178629 |
|---|
| End bp | 1180578 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641318459 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_001584131 |
|---|
| Protein GI | 161520704 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.870155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.271744 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGAC TCGGGCTCAC CTCGAAGCTG TCGATCCTGT TCGCATGCAT CGGCGTGATC
GCGTCCGGCT CGACCGGCTA CTACACGTAT CGCGCGAACC GCGCGATGCT CGCGCAGGAA
GCGCAGCACA GCCTGCTGAT GTCGACGCAT TTGCTCGCGC AGCGCTTCAC GAGCGCGCTC
GCGGACGTCG CCGCCGATGC GCTCGTGCTC GCGCAACTGC CGTCGTCGGT ACGCATCGCG
CGCGGCGACA GCCGCACCCC GGCCCCGCGT GCGCGGCTCG AGCAGGTGTA CCGCAGCTTC
ATGGCGAATC ATCCGGAATA TCTGCAGATT CGTCTGATCG AACGCGAGCA TTTCGGGCTC
GAGCGGATTC GCGTCGATCG CGATGCGCGC GGTATCGTCG TGCTGCCGGA ACGCGCGTTT
CAGGAGAAGG GGCAGTTTTC CTACGTCTTC GACACGCTCG CGACGGCGCC CGTGCATATC
TACGTGTCGC CGATCGCGAT CAATCACGAA ACCGGCTCGC ATGCGGCCGA AGGATTGCCG
ATCCTGCGCG TCGGCACGCC GGTCGTCGAT ACGCGCGGGC AGACGGTCGG CGCGCTCGTC
GTCGATATCG AACTGTCGCG CGTGTTCGAG CGTCTCGAAC GCGATCTGCC CGAAGACTAT
GCGGTCTATC TCGCGAACGA GTGGGGCGAC TTCCTCGTGC ATCCCGACCC GTCGCAGACC
TTCGGCTTCG ACCGCGGCCG GCGCGTGCTG ATGCAGGACA GCTTCCCGGC GACGCGCGCG
TTGTTCGACG GCGCACGCAC GAACGTGTCG CTCAGCGATC TCGCGCAGGG CGACGCGTCG
GCGGGCCGCA TGCACGCGTT CGTGCGCACG CCGTTCGGCA GCGACGAAGG CAATCGCTTC
GTCGTGCTCG GCCTCGCGCG GCCGCTGACC GACGTGCTGA CGCCGGCCAA CCGGCTCGGC
GACCGCATCG TGCGGATGGT GCTCGTCTCG AGCGTGTTCG CCGGGATCCT CGCGATCCTG
TTCGCGCGCG CGATCACGCG GCCGCTGCAG GCGCTGGCGC GCGCGGCGAC GCACGTATTC
GACGAGCCGG CTGCCGAGCG GTTGCCGGTC GCGCGCACCG ACGAAATCGG CGTGCTCGCG
CGCTGCTTCG ATGCGATGCG CGTCGAGATC CGCACGCAGG TCGCGATGCT GCGCGCGAAG
CAGCGCGAAC TCGCGCATCT GGCCGGTCAC GATCCGCTGA CCGGGCTGCC GAACCGCATG
CTGTTCATGG AGCGCCTCGA CGCGGCAATC CGCCATGCGT CCGCGGTCGA TGCGGCGCTC
GCGGTGATGT TCGTCGATCT GAATCGCTTC AAGCAGATCA ACGATCAGCA CGGGCACTCG
GTCGGCGACC GGATGCTCGC GCTGGTCGCG AAGCGCTTGA GCCAGGTGCT GCGCAGCGGC
GACATGGTCG CGCGGCTCGG CGGCGACGAA TTCGTCGTGC TGATCTCGGA TCTGCGCTCG
CCCGCCGTGA TCGCCGACGT CGCGTCGCGG ATCCAGCGCG TGATGGCCGA CGAGCTCGAG
CTCGGCGAGC GACGCATGGC GGTGGGCGCG AGCATCGGCG TCAGCGAATA CCCGGCGGAC
GGCGCGTCGG CCGAGGAACT GCTGATGAAG GCCGATGCGG CGATGTATGC GGCGAAGGCG
AGCGGGCAGA GCGCATGCGT GCGCTATCGC GAACTGCTCT GTGCGATTCA GCCGGCCGAG
GCGAGTGCAG CGGCCGACGT GAGTGCTCCG GCCGACGCGA GCGCAGCAGA CGATGCGAGT
GCTGCGGATG ACGCGATTGC GCAGGATGAC GGCACGCCCG CCCGCGAACG GGACGTGCCG
ACGACGCGCG ACGGCGCGAG CGTCGCGCGG ATCGGCGCGA CGCTCACGCG CCTCGACGAC
GTGCGCGGTG CGCGGCGCGA CGGGAACTGA
|
|---|
| Protein sequence | MIRLGLTSKL SILFACIGVI ASGSTGYYTY RANRAMLAQE AQHSLLMSTH LLAQRFTSAL
ADVAADALVL AQLPSSVRIA RGDSRTPAPR ARLEQVYRSF MANHPEYLQI RLIEREHFGL
ERIRVDRDAR GIVVLPERAF QEKGQFSYVF DTLATAPVHI YVSPIAINHE TGSHAAEGLP
ILRVGTPVVD TRGQTVGALV VDIELSRVFE RLERDLPEDY AVYLANEWGD FLVHPDPSQT
FGFDRGRRVL MQDSFPATRA LFDGARTNVS LSDLAQGDAS AGRMHAFVRT PFGSDEGNRF
VVLGLARPLT DVLTPANRLG DRIVRMVLVS SVFAGILAIL FARAITRPLQ ALARAATHVF
DEPAAERLPV ARTDEIGVLA RCFDAMRVEI RTQVAMLRAK QRELAHLAGH DPLTGLPNRM
LFMERLDAAI RHASAVDAAL AVMFVDLNRF KQINDQHGHS VGDRMLALVA KRLSQVLRSG
DMVARLGGDE FVVLISDLRS PAVIADVASR IQRVMADELE LGERRMAVGA SIGVSEYPAD
GASAEELLMK ADAAMYAAKA SGQSACVRYR ELLCAIQPAE ASAAADVSAP ADASAADDAS
AADDAIAQDD GTPARERDVP TTRDGASVAR IGATLTRLDD VRGARRDGN
|
|---|
| |