| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_3741 |
|---|
| Symbol | |
|---|
| ID | 5769494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010086 |
|---|
| Strand | + |
|---|
| Start bp | 705636 |
|---|
| End bp | 707672 |
|---|
| Gene Length | 2037 bp |
|---|
| Protein Length | 678 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641318045 |
|---|
| Product | YscC/HrcC family type III secretion outer membrane protein |
|---|
| Protein accession | YP_001583717 |
|---|
| Protein GI | 161520290 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1450] Type II secretory pathway, component PulD |
|---|
| TIGRFAM ID | [TIGR02516] type III secretion outer membrane pore, YscC/HrcC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.452401 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0121623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGAC GCGTCGTCCC GATCCGGTTT CAGCCGCGCA GCCTGCCGCG CGCGGCGCTC
GCGATGTGCG CGAGCGCGCT GCTTGCGGCG TCGCTCTGCA TGACGATCGC GCAGCCCGCG
CGCGCGGCCG ACCTGCGCTG GCGCAACAAG CCGTTCACGA TCGTCGCGAA CGGCAAGAAG
ATCGGCGACT TCATTCGCGA GCTCGCGTCG TCGCAGGGCG TGACGGCCGT CGTCGATCCG
AAGGTCGACG GCGTGATCAG CGGCCGCTTC TCGGGCACGC CGCAGCAGAC GCTCGACACG
ATCTGCTCGA CGTACGGACT CACGTGGTAC TACGACGGCT CGTTCCTCTA CGTCGATCCG
GCCGACCAGT CGCAGACGCA GATGATCCCG ATTCCGCCGA ACGCGGGCGG CGAGATCGGC
CGCGCGCTGC AGGCGATGCA GATTCCCGAC AAGCGCTACA CGCTCGTCAT CAACGATCGC
GCGAACAGCG TGTACGTGGC CGGCCCGCGC CGCTACGTCG AGCTCGTGCG GCAGGCGATT
GGCAGCGTCG GCGATCCGTC GGCGAACGGC CAGCACGCGG ACATCCGCGC GTTCCGGCTC
AAGTACGCGT GGGCGTCCGA CTTCACGATC AATCGCTCGG GCAAGGAAGT GACGGTGCCG
GGCGTCGCGA CCATCCTGCG CCGGCTGTTC GGCAAGGGCG GCGGCACGGG GCCGATGCCG
ACGAGCGCGC CGCTCGGCCA GGCCGCGCGT CAGGTGAAGC TCGGCTCGGG GCTGACAATC
GCGGTGCCGC GCCTCGAATT CCCCGATCTG TCGGGCGGCC CGCGCAGCGG CGGCTACGGC
GGCGAATCGG CCGCGGGCAG CACGTTCTCG CCGTTCGCGA GCGGCGGCGA CACGCTGCCG
CAGATCGAGG CCGATCCGGC GATCAACGCG GTGATCGTGC GCGATCTGCC CGAGAACATG
TACCGCTACC AGTCGCTGAT CGCGCAGCTC GACGAGCGGC CGCGGATCGT CGAGATCAAC
GTGACGATCA TCGACATCAA CGAGGATTCG CTCGACAGCC TCGGGATCGA CTGGCGGCTG
CACACGACGC ACGGCGACGT GCAGATCGGC AACGGCGCGA ACCCGCTGAA CGGCAACACG
CAGTACAACG GCGCCGGCAA TCCGCCGCTG ACGTTCGGGA TCGGCGCGAG CGAGTCCGGG
CAGACGGGCA CCTTCATGCC GACCGGCATC GCGCTCACCG CATCGATCGG CGGATCGCTG
CGCAACTACC TGCTCACGCG CGTGAATGCG CTCGCGCAGA AGGGGCAGGC GCAGCTGCAT
TCGAAGCCGA AGGTGCTCGC GCTCGACAAC ACCGAGGCGA TTCTCGAGAA CCTCACGCAG
TTCTACGTGC AGGTGCAGGG CTATCAGGAT TCGTCGCTGT ACAGCGTGAC GACCGGCACG
AGCATCAAGG TGACGCCGAT GATCGTCGAC GATGCGATCC GCAATGCGGC CGCCGTGTCG
GGCCGTCCGG AAAGCGTGAT GATGTCGATC GACATCCAGG ACGGCAACAT CGTGCCGGGG
CAGGCGGTGT CGAACGTGCC GGTGATCCAG CAGCGCAACA TCGTCACGAA GACGATGATC
GACGAGGGCA AGAGCCTGCT GATCGCGGGC TTCAACGACG ACGAGGTGCG CCTGAACAAG
AGCGGCGTGC CCTGGCTGTC CGACATTCCG CTGATCGGCA ACCTGTTCAA GTACACCGAC
AAGTCCGGCA ACCACATGGA GCGCTTCTAT CTGCTGACGC CGCGCGTGGT GTCGAGCGCG
TCGATGTACG CGCCGGACGG CTCGCCGGTG AACCCGGGCG TCGATGCGCC GGCCGACCCG
AACGGCGTGT CGATGTACCG GCCGCCCGAC AACGACATCG CGGTGCCGCT GACGCCGCGC
CCGCTGCCCG GCACGAAGTT CGGGCCGCCC GCGCTGCCGC CGCCCGCGCA GGATGCGGCG
TCGCAGCCGA TGGCGACGAC CGCAGGAGCG TCCGCCCATG TCGACGAGCA TCATTGA
|
|---|
| Protein sequence | MRRRVVPIRF QPRSLPRAAL AMCASALLAA SLCMTIAQPA RAADLRWRNK PFTIVANGKK
IGDFIRELAS SQGVTAVVDP KVDGVISGRF SGTPQQTLDT ICSTYGLTWY YDGSFLYVDP
ADQSQTQMIP IPPNAGGEIG RALQAMQIPD KRYTLVINDR ANSVYVAGPR RYVELVRQAI
GSVGDPSANG QHADIRAFRL KYAWASDFTI NRSGKEVTVP GVATILRRLF GKGGGTGPMP
TSAPLGQAAR QVKLGSGLTI AVPRLEFPDL SGGPRSGGYG GESAAGSTFS PFASGGDTLP
QIEADPAINA VIVRDLPENM YRYQSLIAQL DERPRIVEIN VTIIDINEDS LDSLGIDWRL
HTTHGDVQIG NGANPLNGNT QYNGAGNPPL TFGIGASESG QTGTFMPTGI ALTASIGGSL
RNYLLTRVNA LAQKGQAQLH SKPKVLALDN TEAILENLTQ FYVQVQGYQD SSLYSVTTGT
SIKVTPMIVD DAIRNAAAVS GRPESVMMSI DIQDGNIVPG QAVSNVPVIQ QRNIVTKTMI
DEGKSLLIAG FNDDEVRLNK SGVPWLSDIP LIGNLFKYTD KSGNHMERFY LLTPRVVSSA
SMYAPDGSPV NPGVDAPADP NGVSMYRPPD NDIAVPLTPR PLPGTKFGPP ALPPPAQDAA
SQPMATTAGA SAHVDEHH
|
|---|
| |