| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_3739 |
|---|
| Symbol | |
|---|
| ID | 5769440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010086 |
|---|
| Strand | + |
|---|
| Start bp | 703172 |
|---|
| End bp | 705361 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641318043 |
|---|
| Product | type III secretion FHIPEP protein |
|---|
| Protein accession | YP_001583715 |
|---|
| Protein GI | 161520288 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4789] Type III secretory pathway, component EscV |
|---|
| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00728241 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAC CGAAGGCGCT TCCCCGCGAC TGGCAGCGGA TGTTTTCCGT CGGCCGCGGC
GTGTCCGGAC ATCGCCGGAT CGGCGCGTCG CCGCGCGCCG ATCTGTTTCT TGCCGCCTTC
ATCGTCGCCG TCGTCGCGCT GTTCATCCTG CCGCTGCCGC AGGCCGCGCT CGACGGGATG
ATCTCGCTGA ATCTGGCCGC AAGCGTCGTA CTGCTGACCG TGTCGACCTA CGTGCCGTCG
GCGGTCAGCT TCTCGTCGTT TCCCGCGCTG CTGCTGTTTA CGACGCTGTT CCGGCTCGCG
CTGAACATCG CGTCGTGCAA GCTGATCCTG CTGCACGCGA ACGCCGGTCA CGTCATCGAT
GCGTTCGGGC GGCTCGTGGT CGGCAACAAC GTCGTCGTCG GCGGTGTCGT GTTTCTCGTG
ATCGCCGTCG TGCAGTTCAT CGTGATCGCG AAAGGCTCGG AGCGCGTGGC CGAGGTCGGC
GCGCGCTTTT CGCTCGACGC GATGCCGGGC AAGCAGATGA GCATCGACGC GGATCTGCGC
GCCGGCATCA TCAGCGCGGA CGAAGCGCGC GAGCGTCGCG AGAAGCTCGA GCAGGAATCG
CAGATGCACG GTGCGATGGA CGGCGCGATG AAGTTCGTGA AGGGCGACGC GATCGCCGGC
CTCGTGATCG CGTTCATCAA CATCGTCGCG GGCATCGCGG TCGGCACGCT GATGCACGGC
ATGGACATCG GCACGGCGCT GCAGCGCTAC GCGATCCTGA CGGTCGGCGA CGGCATGGCG
TCGCAGATTC CGTCGCTGCT CGTGTCGATC GCGGCCGGCA TCGTGACGAC GCGCGTCGCG
ACGCGCGATG CGCGGCAGCG CCAGCTCGGC GAGCAGCTGG GCGAACAGCT CGGCGCGCAT
CCGCGTGCGC TGCTGATCGC GGCGCTCGTG CTGGCCGGCT TCCTCGTCGT GCCCGGTTTT
CCGAAATGGT CGTTCGCGCT GATCGCCGTG GCGCTCGGCG CGTTCGCGCT GACGCAGCTC
AAGCGCAAGA CGACCGCACC GAGCTTCAAC CTGATCCACG TGGCCGGGCG TGTCGGCGCG
GCCGACGACG GGCAGCCGGC GAAGGTATCG CACGCGGCGG GCGTCACGTC GCTGATCGCG
GTATCGCTGG CCGACGATCT GCGCAGCGCG CTGAACCTCG CGCAGCTGCA GGCCGCCCTG
TCGAACGCGA AGGCGCGCGT CGACGCGGAC ATCGGCACGG TGTTCCCGCG CATCACGCTG
AACGACGACG AGCGCGCGCC GGCCGGCACG TACCGCATCT ATCTGCAGGA CGTGCTCGCC
GCGCACGGTG CGCTGAAGCC CGGCTGGCTG CTGTGGGACG GCGTCGCGCC GCTGCCCGAG
CGCGCGGAGC GTCAGCCGGC CGAAGCGTTC GGCCCGTTCG CGACGGCACT GTGGGTCAAG
CCGGACGGCG CGCCGCCGGA CGGCAAGTGG TTGACGAGCG AGGCGGCGCT CGCCGCGCAC
GTCGAGCAGA TCGTGCGCGA GCACGCGGAC GAACTGCTCG GCATCCAGGA GACGCAGGCG
CTCGTGCATC TGGTGCGGCG CGATCACCCG GAGCTCGTCG GCGAACTGAC GCGGCTCGTG
CCGCTGCAGC GCGTGACCGA GGTGCTGCGC CGGCTGCTCG CCGAGCAGGT GCCGATCCGC
AATCTGCGCG TGATCTTCGA AAGCCTGATC ACGTGGGCGC CGAACGAGCC CGACGACGTG
ATCGCGCTCG TCGAGCTCGT GCGCGTCGAC CTGCGCCGGA TGATCACCGA TCGCCACGCG
GGCGCCGCGC GCCAGCTGCG CGTCGTGCTG TTCGAGCAGA ACCTGCAGGA GCGCATCGAG
AACGCGGTGA TGCGCACGAA GCAGGGCAAC TTCCTCGCGC TGTCGAGCGC CGTGAAGCAG
GACATCGGCG AGCAGGTGCG CGCCATCGTG CAATCGGCGC ACGCGAGCGG CGCGCACGGC
GCCGCGCGGC TCGCCGTGAT GGTCGCGCTC GGCGCGCGCC GCTACGTGAA GACGATCCTG
CAGCCGATGC TGCCCGATCT TCCGGTGCTG TCGTATCAGG AGATCGAGGA GGACGTGCAG
CTGCATACGG TCGGCTGGGT CAAGAACCCG CCGGACGACG GCACGGTCGG CGCCGGCGCC
GACGTGCGTA CACCGGGCGT CGCGCAATGA
|
|---|
| Protein sequence | MAEPKALPRD WQRMFSVGRG VSGHRRIGAS PRADLFLAAF IVAVVALFIL PLPQAALDGM
ISLNLAASVV LLTVSTYVPS AVSFSSFPAL LLFTTLFRLA LNIASCKLIL LHANAGHVID
AFGRLVVGNN VVVGGVVFLV IAVVQFIVIA KGSERVAEVG ARFSLDAMPG KQMSIDADLR
AGIISADEAR ERREKLEQES QMHGAMDGAM KFVKGDAIAG LVIAFINIVA GIAVGTLMHG
MDIGTALQRY AILTVGDGMA SQIPSLLVSI AAGIVTTRVA TRDARQRQLG EQLGEQLGAH
PRALLIAALV LAGFLVVPGF PKWSFALIAV ALGAFALTQL KRKTTAPSFN LIHVAGRVGA
ADDGQPAKVS HAAGVTSLIA VSLADDLRSA LNLAQLQAAL SNAKARVDAD IGTVFPRITL
NDDERAPAGT YRIYLQDVLA AHGALKPGWL LWDGVAPLPE RAERQPAEAF GPFATALWVK
PDGAPPDGKW LTSEAALAAH VEQIVREHAD ELLGIQETQA LVHLVRRDHP ELVGELTRLV
PLQRVTEVLR RLLAEQVPIR NLRVIFESLI TWAPNEPDDV IALVELVRVD LRRMITDRHA
GAARQLRVVL FEQNLQERIE NAVMRTKQGN FLALSSAVKQ DIGEQVRAIV QSAHASGAHG
AARLAVMVAL GARRYVKTIL QPMLPDLPVL SYQEIEEDVQ LHTVGWVKNP PDDGTVGAGA
DVRTPGVAQ
|
|---|
| |