Gene Bmul_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBmul_3488 
Symbol 
ID5769903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia multivorans ATCC 17616 
KingdomBacteria 
Replicon accessionNC_010086 
Strand
Start bp412622 
End bp413572 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content63% 
IMG OID641317791 
Productcholine ABC transporter, periplasmic binding protein 
Protein accessionYP_001583464 
Protein GI161520037 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID[TIGR03414] choline ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.182121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC TATTGATCGC AGCGGCATGT GGCGTCGGGA TCGCCGCCGC GCCGGTATCA 
GCCGTGTACG CGGCCGATCC GCCGGTGTGC AAGAACGTCC GGTTCGCGGA CGTCGGCTGG
TCCGACATTG CGGCGACCAC GGGCCTCGCG TCGACGATGC TGCAAGGTCT CGGCTACAAC
CCGACGAAGA CGATCGCGTC GGTGCCGATC ACGTTCGCGG GGATCAAGAG CAAGCAGATC
GACGTGTTCC TCGGCTACTG GTCGCCGACG ATGGACCCGA TCATCCAGCC GTTCACGAAG
GCCGGCACGA TCAAGGTGCT CGCGACGCCG AACCTGACCG GCGCGAAATA CACGCTCGCG
GTGCCCGACT ACGTCTATCA GGGCGGCCTG AAGTCGTTCC AGGACATCCA GAAATACGCG
GACAAGCTGA ACGGCAAGAT CTACGGCATC GAGCCCGGCA ACGACGGCAA CGCGCTGATC
AAGAAGATGA TCGACACGAA CCAGTTCGGC CTCGGCAAGT TCAAGCTCGT CGAGTCGAGC
GAGGCGGGGA TGCTCGTCGA GGTGAATCGC GCGATCCGCG ACAAGCAGTG GATCGTGTTC
CTCGGCTGGG AGCCGCACCC GATGAACGTG CAGATGAAGA TCGACTATCT GACCGGCGGC
GACGACGTGT TCGGCCCGAA CTACGGCGAG GCGAAGGTGC TGACGGCCAC GCCGCCCGAC
TATGCGCAGC GTTGCCCGAA CGTCGCGAAG TTCGTGTCGA ACCTGCAGTT CACGACGTCG
ATCGAGAACC ACGTGATGGT GCCGATCATG AACAAGGAAG ACCCGAACAA GGCCGCGAAG
GAATGGCTGA AGGCGAATCC GCAGTCGCTC GACAAGTGGC TCGCCGGCGT GACGACGATC
GACGGCAAGC CCGGCCTGCC GGCCGTGAAG GCCTATCTCG GCGTGCAGTA A
 
Protein sequence
MKRLLIAAAC GVGIAAAPVS AVYAADPPVC KNVRFADVGW SDIAATTGLA STMLQGLGYN 
PTKTIASVPI TFAGIKSKQI DVFLGYWSPT MDPIIQPFTK AGTIKVLATP NLTGAKYTLA
VPDYVYQGGL KSFQDIQKYA DKLNGKIYGI EPGNDGNALI KKMIDTNQFG LGKFKLVESS
EAGMLVEVNR AIRDKQWIVF LGWEPHPMNV QMKIDYLTGG DDVFGPNYGE AKVLTATPPD
YAQRCPNVAK FVSNLQFTTS IENHVMVPIM NKEDPNKAAK EWLKANPQSL DKWLAGVTTI
DGKPGLPAVK AYLGVQ