Gene Bmul_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBmul_3247 
Symbol 
ID5769253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia multivorans ATCC 17616 
KingdomBacteria 
Replicon accessionNC_010086 
Strand
Start bp121211 
End bp121831 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content64% 
IMG OID641317545 
Producthemolysin III family channel protein 
Protein accessionYP_001583223 
Protein GI161519796 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.888973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.330902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATGTCG GTGAGCGTTT CAACAGCATT ACGCACCTCG TCGGCGCGCT ATTGTCGGTC 
GCGGGGCTGG CGACGCTCGT GACGATGGGC GCACTCGACG GCGACGCTTA CAAGGTCGTC
AGCTTCAGCG TGTACGGCGC GATGCTCTGC GTGCTCTATG CGATCTCGAC GCTCTATCAC
AGCGTGCGCG ATCCGCGCCT GAAGGCGATC CTGCAGAAAT GCGACCACGC GGCCATCTAT
CTGCTGATTG CGGGCAGTTA TACGCCGTTT ACGCTCGTCA CGCTGCGCGG GCCGTGGGGC
TGGTCGCTGT TCGGCGTGAG CTGGGGGCTC GCGGTGTTCG GCATCGTGCA GGAACTGACG
CTCGGCCGGC GTACGCGCGT GCTGTCGATG GTGCTGTACG TGCTGATGGG ATGGCTCGCG
CTCGTCGCGG TCCGTCCGCT GATTCACGCG CTGCCGCCCG TCGGCACCGC ATGGCTCGTC
GCCGGCGGCG TGATCTATAG CGTCGGCATC TACTTCTTCA TCAACGACGA ACGGATTCGT
CACGGCCACG GGATCTGGCA TCTGTTCGTG CTGGCCGGCA GCCTGTGCCA GTTCGTCAGT
GTCGCGATGT ATGTCGCGTG A
 
Protein sequence
MHVGERFNSI THLVGALLSV AGLATLVTMG ALDGDAYKVV SFSVYGAMLC VLYAISTLYH 
SVRDPRLKAI LQKCDHAAIY LLIAGSYTPF TLVTLRGPWG WSLFGVSWGL AVFGIVQELT
LGRRTRVLSM VLYVLMGWLA LVAVRPLIHA LPPVGTAWLV AGGVIYSVGI YFFINDERIR
HGHGIWHLFV LAGSLCQFVS VAMYVA