| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_3178 |
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| Symbol | |
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| ID | 5768748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia multivorans ATCC 17616 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010086 |
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| Strand | + |
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| Start bp | 23880 |
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| End bp | 29825 |
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| Gene Length | 5946 bp |
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| Protein Length | 1981 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641317476 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001583154 |
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| Protein GI | 161519727 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG3209] Rhs family protein
[COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies)
[TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.568675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAATT TCAAGACGAA CCGGACCTTC TCGGTCAGCG GCCCGGCGCT ACCGGACCTC
GAAGGCATCG GCGCGATGCT GCACCTGAGC GCGATGCGGG GCACGGAACA GCTTTCCACG
CCGTACACGT ACGAACTCTG GCTGACGACG CCCGCCGATC CGCGACTGCC GGCCGAGATG
CTGGCCAACC TCGATCTCAA GGCGATGCTC GGCAAGGAAC TGACCGTCAC GATCCAGCTG
GACGGGATGG GCAGCTTTGT CGCGGGGATG GCCGGCCAGG CGGGCGCGGG GAACCTGGGC
GCCGGTACGC GAGAAATCAG CGGCATCGTG ACGGCGGCCA GCTACGTGGA TCAACTGAAT
CGCCAGTGCC GTTATCGCGT CGTACTGGAG CCCTGGCTGG CACTGGCGCG CGAGCGGACC
GACTATCGCA TCTTCCAAAG GAAGAGCGTG CTCGACATTC TGCGCGAGGT GTTCGGTTCG
TATTGGTATT CGTTCGAGAT GCGCGTCGGC CGCACCTACA GAACGCTGCG CTATCAGGTC
CAGTACGGCG AATCGGACTT CGCGTTTGCC CAGCGCTTGA TGGAGGAACA CGGCATCGCG
TGGTTCTTCG AACACTCGCA AGGCGTACAC CGCCTGGTGC TGGTCGACGG TCCGGGCGCC
TATCGGAGCG TGGAAAGTGT CGCGTATCAG ACGCTCGAGT ACTACCCGCC GGGCCGGAAG
ATCGACCGCG AGCACGTCGA TCGCTTCGAG GCGACGGAGC GTCTGCAATC GGGCGTCTGG
ACCACCGACG ATTTCGATTT CGAGAAGCCG GGTGCGACGC TGACCGCGCA GAACAGCTTG
CCGCGCGAGA CGGCGCACAA CCAGCTCGAA CGTTACGAAT GGCCCGGCGA CTATACGGAA
ACGGAGGACG GCCACGCATT CGCACAAGTG CGCATGGAGG AGATTCACGC GCAGGGCGCA
CGCGCGCAAG GCGAGGGCAA CCTGCGCAAC GTGGTGTGCG GCACGACGTT CGTGCTGGCC
GGCCATCCGA TGGCGAGCGC CAACCGCGAG TATCTGGTGA TCGCGTCGGA GCTGGACGTG
AAGGAAACCG GCGAGACGAC CGGCTTCTCC GCCTACGCGA TTCGCAGCAG GTTCACCGTA
CAGCCGTCCG ACGTTGTATT CCGTCCGCCG CGCACGATCA GGAAACCGCG TACGCGCGGC
CCGCAGACGG CGATCGTGAC GGGCCCGCCG GACGCGGAGA TCTGGACGAA CAAGAACGGC
GAGGTGACGC TCAAGTTCCA TTGGGACCGA TCCGACGTGA AGGATCAGAA CTCGTCCTGC
TGGGTGCGCG TGTCCTATCC GTGGGCCGGC AGCAACTTCG GCGGCATTCA TGTTCCGCGG
GTCGGCACCG AAGTCATCGT CGATTTCGAA AACGGCGATC CGGATCGACC GATCGTGACG
GGGCGCGTCT ACAACGCGAT GACGATGCCG CCGTGGAGGC TGCCGGCTCA CGCGACGCAA
AGCGGGATCC TCACGCGCTC GACCAAGGGC GGCGGATACG GCAACGCCAA TGCGATCCGC
TTCGAGGACA AGAAAGGAGC GGAGCAGGTC TGGATCCAGG CCGAGCGCAA TCTCGATGCG
GTGATCGAGG CCGACGAAAC GCACACGGTC GGGCATGACC GCACGAAGCG GATCGGCCAC
GATGAAACCG ACCAGATCGG GCGACACTGG ACGCTGTCGA CCGGCGGCTA CAAGTTCGAG
ACCGTGACGC TGGCGTCGGT GAAGAGCGTG GGCATGGGCG CGATGTTCAA CGTCGGGATG
GCCTACAACG TCAACGTCGG CGGGCTGTAC CTGCGCAACG TCGGGCTGCA GATGGCCAGC
ACGGTGGGCC GCAGTCGCAC CGACCGCGTC GTGCAGGACT GGACGGCCGA TGTTGGGCAC
ACCTATACGC TGACCGTGCG CGGCAAGGCG GTGGGCGATG CCGTGGCCGC CGATCGGGCG
AATCCGATCG AGCCGTCGCC CGACTTCGCG CCGCAGCTGC CCGCACCGGT ATCGAGCTCG
AACGCCAACC AGCTGCGCAT CGCGGATACG GGCGAGAGCA GCCTGTCGGG CGCGAAACAG
ACGCAACTGA TCGGGCCGGG CGGCACGGTG ACGATCGACG AGTCCGGCAT TCATCTGAAA
GGCACGGCGA TTTACCTGCA GGCGCCGACG ATCAGCATGA CGAACGGCAA TGCCGGTGGC
CTCGCGCCGG TGACCGAAGC CGACTGCGCG GAATGCGCGA AGAAGAGCGT CAGTGCGAAC
CCGGTCGATC TGGCGACGGG GCAGAAGGTG CTGTCGCATA CGGACTTTAC GTTGCCCGGC
CGCGTATCGA TCGACTGGAG CCGGAGCTAC CGTAGCGCGG ATCAGCGCCG CGGCAGTCTG
GGCGTTGCAT GGAAGCTGCC GTATGCAACG GAAGTGCGCA CGAGCGCGAC AGGCTTGATC
TACTTCGACG CCGACGGGCG GCAGTTGCAG TTTCCGGCCT TGAACCCAGG CGAAGCGCAT
TTCCATCCGA TCGAGAAGTT CACGCTGATG CGCGGTGACG ACAACGCGTC GGGCGCCACC
TATGCGCTGC GTTTCGGCAA TGGCGTCGAA GAGCATTACG GCCGTCACCC GGTCGACGAG
ACGCGCTGGC AATTGCAACG CATCGCGACG CGCGACGGCC AGTGCCTGAC GCTCGGCTAT
ACGGCACAGG GCTGGTTGGA AACAGTTCGC AACAATGTGC ATACCGTGCG CTGCGCGCTC
GACGATGCCG GCCGGATCAC GAGCGTGTTG CTCGACCAGG GTGTCGGCAA TCAGCCGCTG
CACCTGACGA GCTACGTGTA CGACGAGCAC GGCGATCTGG TCGAGGCCAC CGATCGCGAG
AACCTGACGT GGCGCTACGG CTACGACAAC CATCTGCTGA CGACCTACCG CACGCCGGCC
GGCGCGACGC ACGTATCGGA GTGGAGCGAC GACACGCCGA ATGCGTACTG CCTGCGGACC
TACGCCTATA CCGAAGGCGC CGACGGGCAG CGAGTCGTCA CACGCGAGAT GCGTTTCGAT
TACCTGCCGT CGCTGCGCGC GACGCGGGTG ACGGACGGCC TCGGGCATAC GACCGAATAT
CACTACAACG GCCTGTGGGC GGTCGAGAAG ATCGTGCATC CCGACGGCAG TGTCGAGCAG
ACGCATTTCG ACGAGACGGG GAGCGTGGCC GGCTACACGG ATGCACTCGG TCGCACGACG
CGGATCGTGA ACGATGCGCG CGGCAATCCG ACGTCGATCA TCGACCCGGC CGGCAACGTC
ACGCGCATCA GCTATGGCGA GCACAACCTC CCGGAACAGA TTACCGACCC GGCCGGGCAG
ATCTGGCAGC GCGGCTACGA TGCGCACGGT CACCTGACGA GCGAAACCGA TCCGCTCGGC
AACGTGACGC GTTACGCCTA CGAAAACGGC TTGCCCGTCG CGCGCACGGA TGCACTGGGG
AACGTGACGA AGATGCAATG GGACGACGCG GGTCAGCTCG TGGCGCGCAC CGATTGCTCC
GGACACACGA CGACCTATGA CTACGATCCG TTCGGCCAGT TGACCGAGAC CACCGACGCG
CTCGGTCAGG TGAGCCACCA CAGCGGCAGC GTGTCTGCGC GCGTGACGGC GGTGCAGCCG
GCCGGCATGG GCTGGTGGAA GGTCGAATAC GACGAAGCGG GTCGCGCGAT CGCGCATACG
GATCCGCTCG AGCGCGTGAC GCGCGTGGAC TGGGACGGTT ACGGGCAGCG AACGCAGATC
GTCGATCCGG CGGGCGGGAC GCAACAGTTC CGATATGACG CGATCGGCCG TTTGACGAAG
CTCACCAATG CGAACCAAGA GACGACTACG TTCCGCTACG ACAGCCGCAA CCGCTTGATC
GAACAGACCG GCTTCGACGG CCGTCGGCAG AGCTACCGGT ACAACGCGGC GGGCGAACTG
GTCGAGCGCA TCGATCACGG CCAGGACGGA CAGATCGCGA CGCACGTGAC CTACGACGTG
CTTGGCCGCC CGGTGGAGCG ACGCTCGAGC GATGGGAGCC AAGCGAGCTA TCGCTACGAC
GAGCGCGGGC TGCTGACGCA GGCGCAGGCG ATCGTGCCCG GGCGTGCGCC GGTGCACGTC
ACTTACGAAT ACGACGCAGC CGGGCGCCGC ACGGCGGAGG TGCAGGCGCA TCACGGGCGG
GTCTGGCGGC TCACGCACGG CGTGGACGCG ATCGGGAATC GCGACTGGAC GCACGTGCCG
GACATCGGTT CGCTGGTCTG GCAGCGCTAC GGCTCGGGGC ATGTGCACGG CATCCTGCTC
GACGAGCATC CGCTGGCGAG TTTCGAGCGC GACGCGCTGC ATCGGGAAAT CCGGCGTACG
CAAGGTCCGG CGTCGCATCA CTTCGGGTAT GGCGCGAATG GCCTGCTGGC GGTGCATCGC
TGGCAGAACC TCGATGAACG GGGGCGCTCG CTGGAGCATC CGCGGCCGTG GCGGGCGTGG
GCATACGACG ACGCCGGTCA GCTGACGACG CTGGACGATG CGTGGCGCGA TCAGAAGGCG
TATCGGTACG ACGCGCTATC GCGGCTGACG CAGGTGATGG CGGCGAGCGG ACCGGAAGCG
TTTCATTACG ATCCGGCGGG AAACCTGCTG GCTGCTGCGC CGAGCCGGGA CAACATGCAG
GCGTGGAAGG CGAGCGGCGA TCGCTTGCTG CGGTTTGCGC CGCAGACGCG CCCGGATCGT
CCGGTGGATT TTACGTACGA CGGGCATGGC AATCGCATTG CGCGGACGGT GCCGTTGCCG
CCGAAGCCGG CGCTGACGGA AGCGGAGAAG CGCAGCCAGC GCGGGACGGA CAACCTGCTG
CGCGTGATGG AAGTGCTGAC GGGGACGCCG AAGTACGAGG AGCCGTCGGA AGTGCCGGAG
GTGACGCGGT ATCGGTACGA CGGCAGCCAC CAGTTGATCG CGATCGAACA TGCGGACGGG
GCGAGAAGCG AGTACGAATA CGACGCGCTC GGTCGGCGGG TGGCGAAGCA TCACACGCCG
GCGGGCGGCG CGCAGCAGAC GACGCTGTTC ATGTGGGACG GCGACTGGAT GATGCAGGAG
GTGCGCACGG GGCGCACGTC GCATGAGGAC AGGGCGGTGA CCTATGTGCC GCATCCGGAT
CATGAAGGAC CGTTGACGCG GCTGGCGGAT GGGCAGGCGT GGCACTACGT GACGGATCAC
CTGGGGACGC CGCAGGAACT GTACGACGAA CAGCGCGAGG TGTTGTGGGC GGCAGATTTG
AGCGCGTATG GACGTACGGC GAGGTGGTTG ACGCGTGTTG TTGACAATCC GATACGTTTT
CCGGGGCAGT ACCGGGATGA GGAGTCAGGG CTGCATTACA ACCGGTTCAG GTACTACGAT
CCGATGGTGG GGCGGTATAT CAATCAGGAT CCGATCGCCT TTGATGGTGG AATCAATTTT
TACAGCTATG CAGATAGTGC GCCTAACATT GCTTACGATC CGAAAGGCCT ATTTGTTCCA
TTGATCGCTG TTGCTTCATT TTTGGGGAGA GGGGCGCTTG GTGGGGCGGT CGAAATTGCT
ATGCAAGGGG CAAAGCAAGT ATTCAGGCAA GCAAAAAATA ATTGGGTTGA TGGGCGTCCG
CTAACCGATA TTGATTGGGA TTGCGTAAAA ATCGACTGGA CAGATGTGGG GGTTTCAGTC
GCCGTCGGAG GCGTGGCGCC TAGTTTGGGG GCGACTAGAA AAAGCGTAAC TAGATCCATA
AAAGCCATTA GAAATCTATC TAATCAATCC GCTAACACGG CAAATCGCGC GGCAAAATTG
AAGGTGCGCG TTGACATTAA AAAGGATTCA ATCAAACGCG ATTTGATCGT GCAGGGGGCA
TGGCAAGGAA TTAAGCAGGG TGCAAAGTGT GCTTTTGGTG AGGAGAAAAA ATGCGAGGAA
GAGTAG
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| Protein sequence | MVNFKTNRTF SVSGPALPDL EGIGAMLHLS AMRGTEQLST PYTYELWLTT PADPRLPAEM
LANLDLKAML GKELTVTIQL DGMGSFVAGM AGQAGAGNLG AGTREISGIV TAASYVDQLN
RQCRYRVVLE PWLALARERT DYRIFQRKSV LDILREVFGS YWYSFEMRVG RTYRTLRYQV
QYGESDFAFA QRLMEEHGIA WFFEHSQGVH RLVLVDGPGA YRSVESVAYQ TLEYYPPGRK
IDREHVDRFE ATERLQSGVW TTDDFDFEKP GATLTAQNSL PRETAHNQLE RYEWPGDYTE
TEDGHAFAQV RMEEIHAQGA RAQGEGNLRN VVCGTTFVLA GHPMASANRE YLVIASELDV
KETGETTGFS AYAIRSRFTV QPSDVVFRPP RTIRKPRTRG PQTAIVTGPP DAEIWTNKNG
EVTLKFHWDR SDVKDQNSSC WVRVSYPWAG SNFGGIHVPR VGTEVIVDFE NGDPDRPIVT
GRVYNAMTMP PWRLPAHATQ SGILTRSTKG GGYGNANAIR FEDKKGAEQV WIQAERNLDA
VIEADETHTV GHDRTKRIGH DETDQIGRHW TLSTGGYKFE TVTLASVKSV GMGAMFNVGM
AYNVNVGGLY LRNVGLQMAS TVGRSRTDRV VQDWTADVGH TYTLTVRGKA VGDAVAADRA
NPIEPSPDFA PQLPAPVSSS NANQLRIADT GESSLSGAKQ TQLIGPGGTV TIDESGIHLK
GTAIYLQAPT ISMTNGNAGG LAPVTEADCA ECAKKSVSAN PVDLATGQKV LSHTDFTLPG
RVSIDWSRSY RSADQRRGSL GVAWKLPYAT EVRTSATGLI YFDADGRQLQ FPALNPGEAH
FHPIEKFTLM RGDDNASGAT YALRFGNGVE EHYGRHPVDE TRWQLQRIAT RDGQCLTLGY
TAQGWLETVR NNVHTVRCAL DDAGRITSVL LDQGVGNQPL HLTSYVYDEH GDLVEATDRE
NLTWRYGYDN HLLTTYRTPA GATHVSEWSD DTPNAYCLRT YAYTEGADGQ RVVTREMRFD
YLPSLRATRV TDGLGHTTEY HYNGLWAVEK IVHPDGSVEQ THFDETGSVA GYTDALGRTT
RIVNDARGNP TSIIDPAGNV TRISYGEHNL PEQITDPAGQ IWQRGYDAHG HLTSETDPLG
NVTRYAYENG LPVARTDALG NVTKMQWDDA GQLVARTDCS GHTTTYDYDP FGQLTETTDA
LGQVSHHSGS VSARVTAVQP AGMGWWKVEY DEAGRAIAHT DPLERVTRVD WDGYGQRTQI
VDPAGGTQQF RYDAIGRLTK LTNANQETTT FRYDSRNRLI EQTGFDGRRQ SYRYNAAGEL
VERIDHGQDG QIATHVTYDV LGRPVERRSS DGSQASYRYD ERGLLTQAQA IVPGRAPVHV
TYEYDAAGRR TAEVQAHHGR VWRLTHGVDA IGNRDWTHVP DIGSLVWQRY GSGHVHGILL
DEHPLASFER DALHREIRRT QGPASHHFGY GANGLLAVHR WQNLDERGRS LEHPRPWRAW
AYDDAGQLTT LDDAWRDQKA YRYDALSRLT QVMAASGPEA FHYDPAGNLL AAAPSRDNMQ
AWKASGDRLL RFAPQTRPDR PVDFTYDGHG NRIARTVPLP PKPALTEAEK RSQRGTDNLL
RVMEVLTGTP KYEEPSEVPE VTRYRYDGSH QLIAIEHADG ARSEYEYDAL GRRVAKHHTP
AGGAQQTTLF MWDGDWMMQE VRTGRTSHED RAVTYVPHPD HEGPLTRLAD GQAWHYVTDH
LGTPQELYDE QREVLWAADL SAYGRTARWL TRVVDNPIRF PGQYRDEESG LHYNRFRYYD
PMVGRYINQD PIAFDGGINF YSYADSAPNI AYDPKGLFVP LIAVASFLGR GALGGAVEIA
MQGAKQVFRQ AKNNWVDGRP LTDIDWDCVK IDWTDVGVSV AVGGVAPSLG ATRKSVTRSI
KAIRNLSNQS ANTANRAAKL KVRVDIKKDS IKRDLIVQGA WQGIKQGAKC AFGEEKKCEE
E
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