Gene Nmar_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1792 
Symbol 
ID5773381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1635808 
End bp1637520 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content38% 
IMG OID641317448 
Productthermosome 
Protein accessionYP_001583126 
Protein GI161529300 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02339] thermosome, various subunits, archaeal 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATGC AAGCTACTTC TAAAGGAAAT ATGCCCGTCG TATTGCTCAA AGAAGGTGGT 
TCAGAAACTA AAGGTAGAGA TGCACAAAAG AACAACATTG CTGCATCAAA GATAGTTGCT
GAGATTGTTC ATACCAGTTT AGGTCCTAGA GGCATGGATA AGATGCTAGT TGATTCCCTA
GGAGATGTTA CTATTACAAA TGATGGAGCA ACAATTCTCA AAGAAATTGA TGTTCAACAC
CCAGCAGCAA AAATGCTCGT TGAGATTTCT AAAACAACTG ACAATGAAGT TGGAGATGGA
ACAACTTCTG CCGTGGTTTT GGCAGGAGCC TTACTTGAGA ATGCCGAGTC ATTAATTGAT
CAAGATGTTC ACCCAACAAT TATTGTTGAT GGTTATAGAA AGGCTGGAAG AAAAGCCAAG
CAATTTCTTG AAAGTATATC TGATAAAATT TCTCCAAATG ATAAGAATAT TCTCAATAAA
ATTGCAAAAA CTTCTATGCA AACAAAACTT GTTAGAAAAG ATTCTGATCA ACTTGCAGAC
ATTATTGTAA AATCGGTTCT TGCTGTTGCA GAAAAAGACT CTGAAAGTTA TGATGTTGAT
ATTGATGACA TTAAAGTTGA AAAGAAAGCA GGTGGTTCAA TAAAGGACTC TATGATTGTT
CAGGGTATAG TTTTGGACAA AGAAATTGTT CATGGAGGAA TGCCTAGAAA GATCAATGAA
GCAAAAATTG CTTTGATTAA CACTGCCCTA GAAATCAGTA AAACTGAAAC CGATGCTAAG
ATTAACATTT CAAATCCTCA ACAATTGAAA TCATTTCTAG ATGAAGAAAA TAGAATGCTA
AAAACAATGG TTGACAAAGT TATCGGTTCT GGTGCAAATG TAGTTTTGTG TCAAAAAGGA
ATTGATGACA TGGCACAACA TTACTTGGCA AAAGCCGGAA TTATAGCTGT TAGAAGAATT
AAGGAAAGTG ACTTGACAAA ACTAGCAAAA GCAACAGGCG CAAGAATAGT CACAAACCTT
GATGATCTCT TTGAAAAAGA TCTTGGTAGT GCTGACCTTG TTGAGGAAAG AAAGATTGAG
GAAGACAAAT GGGTATTTGT TGAAGGATGT AAACATCCAA AATCTGTAAC ATTACTTCTA
CGTGGTGGCT CACAAAGAGT TGTTGATGAA GTAGAACGTT CTGTTCATGA CGCTTTAATG
GTTGTAAAAG ATGTAATTGA AAAACCAGAA ATTGTAGCAG GTGGAGGCGC CCCTGAAACA
TATGCCGCTA CAAAACTTAG AAACTGGGCT AAATCTCTTG AAGGTAGAGA ACAATTAGCT
GCAGAAAAAT TTGCTGATGC TTTAGAAGCA ATTCCATTAA CACTTTCAGA GAATGCTGGA
ATGGATCCAA TTGATACTCT TACCCTGTTG CGTTCAAAAC AACAAAAAGG TGAGAAATGG
ACAGGTATTG ATGTTATGAA AGGAAAAATT GCTAACATGA AATCTAGTGA TATTATTGAA
CCTCTTGCAG TAAAACTTCA GATTGTTTCA GCATCTGCTG AAGCTGCATG TATGATTCTT
AGAATTGATG ATGTAATCGC TACTCAGAAA TCTGCTGGTG GTCCACCTGG TGGTGGAGAA
GGCGGAATGC CACCTGGAAT GGGCGGAATG CCACCTGGAA TGCCTGGAAT GGGCGGTATG
GGTGGAATGC CTGACATGGG CGGTATGATG TAA
 
Protein sequence
MAMQATSKGN MPVVLLKEGG SETKGRDAQK NNIAASKIVA EIVHTSLGPR GMDKMLVDSL 
GDVTITNDGA TILKEIDVQH PAAKMLVEIS KTTDNEVGDG TTSAVVLAGA LLENAESLID
QDVHPTIIVD GYRKAGRKAK QFLESISDKI SPNDKNILNK IAKTSMQTKL VRKDSDQLAD
IIVKSVLAVA EKDSESYDVD IDDIKVEKKA GGSIKDSMIV QGIVLDKEIV HGGMPRKINE
AKIALINTAL EISKTETDAK INISNPQQLK SFLDEENRML KTMVDKVIGS GANVVLCQKG
IDDMAQHYLA KAGIIAVRRI KESDLTKLAK ATGARIVTNL DDLFEKDLGS ADLVEERKIE
EDKWVFVEGC KHPKSVTLLL RGGSQRVVDE VERSVHDALM VVKDVIEKPE IVAGGGAPET
YAATKLRNWA KSLEGREQLA AEKFADALEA IPLTLSENAG MDPIDTLTLL RSKQQKGEKW
TGIDVMKGKI ANMKSSDIIE PLAVKLQIVS ASAEAACMIL RIDDVIATQK SAGGPPGGGE
GGMPPGMGGM PPGMPGMGGM GGMPDMGGMM