| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1781 |
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| Symbol | |
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| ID | 5774282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1627930 |
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| End bp | 1628472 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 641317436 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001583115 |
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| Protein GI | 161529289 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAACTT TTGTGGCAAT TGAGATTTCA GAAAATGACA TAAAAAAATC TATTAAAGAT
TTTCAAAATA AATTACAAAT TAATGCAAAG CCAATAAATT CAGATCAATT ACATTTTACA
TTACAATTTT TGGGAGAAAT TTCTGAAGAA CAAGTGCAAA AAGTAATTGA ATCACTACAA
ACAATCAAGT TTTCTGAATT TACCATAAAC TTGAAAGGAA TAGGAGCATT TCCCAAACCA
AAATTTCCAC GAGTGATTTG GATTGGAACA GATGAAGAAG GAGGGAAAAA TCTGATTGAA
TTGGCAAAAA AAGTGGAAAA TGTGCTTAAA CCTCTAGGAT TAGTTTCTGA TAAACCATTC
AAGCCACACA TTACAATATT TAGAATTAAA AAGAAGATTG GAGATATGAC AGAGGAATTG
AATAAACAAA AGTTTATGGA TTTTGGAATG CAAAAAATTT CTAGGATTAT GCTGAAAAAA
AGTGAACTTA CATCTGATGG ACCAATCTAT TCTAATTTAG AGGAGGTAAT TGCTGTAAAA
TGA
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| Protein sequence | MRTFVAIEIS ENDIKKSIKD FQNKLQINAK PINSDQLHFT LQFLGEISEE QVQKVIESLQ
TIKFSEFTIN LKGIGAFPKP KFPRVIWIGT DEEGGKNLIE LAKKVENVLK PLGLVSDKPF
KPHITIFRIK KKIGDMTEEL NKQKFMDFGM QKISRIMLKK SELTSDGPIY SNLEEVIAVK
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