| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1769 |
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| Symbol | |
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| ID | 5774595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1615819 |
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| End bp | 1617138 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641317424 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001583103 |
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| Protein GI | 161529277 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAATTTAG TAAGAAAACA ACAAATGTCA GAATTAGATC GTCACATGGG ACTTTTTCAT
CTTACCATGT ATGGTGTCGG ATTAATTTTG GGTGCAGGAA TTTATGTATT AATTGGAGAA
GCTGCTGAAT TTGCAGGAAA TTCAATGTGG ATTTCTTTTT TGATGGCTGC AATAGTTGCT
ATGTTTGCAG GATTAAGTTA TGCTGAATTA TCTGCATTAT ACCCAAAAGC AGCAGCAGAA
TACACTTTTG TAAAGAATGC ATTTAAGAAT AATTTTTTTG GTTTTATTAT AGGATGGCTA
ACAGCCATTA CAGGGGTCAT AGTTGCAGCA ACAGTTTCAC TAGGATTCGG AGGGTACCTT
ACTCAGTTTA TTGATTTACC AATTACAATT AGTGCTGTTT TTCTCATTAT TATTTTATCT
ATTGTTAATT TTATCGGAAT AAGAGAATCT GCTTGGGCAA ATACCATTTT TGCATTAATT
ACTGCAGCAG GACTTGTTCT CATTATTTTT CTTGGTTTTT CAATGGAACC AATTGAACCG
ATTGATTATT TTGAAGCACC AACCGGAATG ACTGGCATAA TTCTAGCATT TGTGTTAATT
TTCTTTGCCT TTATTGGATT TGAAGATATG GCAAATGTTG CTGAAGAAGT TAGAAAACCA
AAGAAAACAA TTCCAAGAGC AATAATTTTG TCCATAGTGA TAACTGGGAT AATTTACATC
CTAGTTTCGT TAGCATCAAT TCGAATTCTG AATTGGGAGA ATTTAGCTTT ATCTTCAGCA
CCTTTAGCAG ATGTTGCACA TTCCGCAATA GGCGTGAACG GGAGTATCAC ACTTTCATTA
ATTGCGCTTT TTGCTACGGC AAGTACTGTT CTAATTACAC TAGTTGCAAA TGCTAGAATT
CTTTACGGTA TGGCAAAGAG CAATTCTCTT CCTAAATTTT TGTGCAAAGT TCATCCAAAA
ACTAAAACTC CATGGCTAGC TGTTATTGGA ACTTTAGTGG CGTCAGTAGG TTTTGCCTTT
GTTGGAGATA TAGTAGTTAT TGCAAATATC GTCGTTTTTG CAGTAGTAAT TACTTTTGCA
GCAATTAACT TGGCAGTGAT TGTTCTGCGA TATACAGAAC CAGTTTTAGA AAGACCATTT
AGAGTTCCAG TAAATGTTGG AAAATTTCCA GTTCTACCAT TGTTTGGATT TGGTACAACG
ATTTACATGG CATTACAGTT TGAAGTTGAA GTAATTCTTG TTGGATTAGT AATAATTGCA
ATTGGTTCTG TTTTGTATGT GATTTTAAAG AGAAGAAAAG ATTTTATGAA TTCTGATTAA
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| Protein sequence | MNLVRKQQMS ELDRHMGLFH LTMYGVGLIL GAGIYVLIGE AAEFAGNSMW ISFLMAAIVA
MFAGLSYAEL SALYPKAAAE YTFVKNAFKN NFFGFIIGWL TAITGVIVAA TVSLGFGGYL
TQFIDLPITI SAVFLIIILS IVNFIGIRES AWANTIFALI TAAGLVLIIF LGFSMEPIEP
IDYFEAPTGM TGIILAFVLI FFAFIGFEDM ANVAEEVRKP KKTIPRAIIL SIVITGIIYI
LVSLASIRIL NWENLALSSA PLADVAHSAI GVNGSITLSL IALFATASTV LITLVANARI
LYGMAKSNSL PKFLCKVHPK TKTPWLAVIG TLVASVGFAF VGDIVVIANI VVFAVVITFA
AINLAVIVLR YTEPVLERPF RVPVNVGKFP VLPLFGFGTT IYMALQFEVE VILVGLVIIA
IGSVLYVILK RRKDFMNSD
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