Gene Nmar_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1767 
Symbol 
ID5774134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1614058 
End bp1615212 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content32% 
IMG OID641317422 
Productheat shock protein DnaJ domain-containing protein 
Protein accessionYP_001583101 
Protein GI161529275 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAAA GTAATTATGA TATCCTAGGA ATTGTTGAAG GGACTACTGA AAAAGAGATC 
CGTGATGCAT TTAGAAGATT AGCTCTTCAA TATCACTCTG ATCGTGGTGG AGAAAATGAA
CAATTCATAA AAATTAAACA AGCATATGAA GATCTAAAAA TTGGAAAAAA ATATCCCGAA
ACAGATATTG AAAAAATAAA AAACTCTAGA GTTTATTCTG ATGAATCTGA AGCTGATGTA
AGAAGAAAAA ATCAGATTTT GGGTCAACAA CTATCTAAAG AAATGAAAAC AGCCGAAGAA
TGGGCTGCTG CACACAACAG AGCAAATTCT ACTGGAACTA GATTATTTGG TTCAAAAACT
CTTGGTGAAA TTGAATTAGA AAGAAAAGCT AATGGTGCTT TGTCTATTAA AGGAAATTTC
ATGGCAGGAA GTTTAACTTA TGACGGTCCA ATTACTATGC AAGGAAGTAT CACTAGTCCG
TCATGGACTA GAGAATTTCA AACAAACATT CATCTAACAA AAGGAGACTT CAAATTTTTT
GATCCTGTGG AAAATAAATA CAAAATTGAA AATGGGGCAC AAATTACTGT AGATAACGGA
AATGTTGTTG TGGGAAATAT TTTTGGCAGA AAATTCAGAG TTGAAGATCC TGATGGTAAA
GTTGGCGTCT ATAAAATTCT AGAGCATAGA ACTAGTATTT CTGCTCCAAA TGGAAAAATT
ATTGCTGAAA ATGTAGTCAA TACTGTATCA TTAGATGCTG ATACTGTTAT TGTGCTAAAT
GTGGAAGATG ATGTGAGAAT TTCTGCACGC GAGGTCTTAT TTTATGGAGG AAAACTTACC
TATGATTCTG TAATCAAACT AAAAGAAGGA GGCTCAATTC GATTCTTTGA AAATTTCTCA
ATACAAGGAT TGAGTGGTGA TGCTAAAATT GAATTAGAGA ATGGTAAGAA AATAAGATTA
TTTGATCTAA AAACAAAGAA AATCAAAGAT TTGGCAGACG AATTTGTTCC TAACAAGGAG
AATTATACAA ATGATGCAAC CATGGTTGGC CATGGATTTA CAATCACATA TGACATGCTT
AACAATCTAT CAAAAAAACC AACAAAGAAA CAAAAATCAG GATGGGCATC TAGATTTGGT
TTTTCTAAAA ATTAA
 
Protein sequence
MVESNYDILG IVEGTTEKEI RDAFRRLALQ YHSDRGGENE QFIKIKQAYE DLKIGKKYPE 
TDIEKIKNSR VYSDESEADV RRKNQILGQQ LSKEMKTAEE WAAAHNRANS TGTRLFGSKT
LGEIELERKA NGALSIKGNF MAGSLTYDGP ITMQGSITSP SWTREFQTNI HLTKGDFKFF
DPVENKYKIE NGAQITVDNG NVVVGNIFGR KFRVEDPDGK VGVYKILEHR TSISAPNGKI
IAENVVNTVS LDADTVIVLN VEDDVRISAR EVLFYGGKLT YDSVIKLKEG GSIRFFENFS
IQGLSGDAKI ELENGKKIRL FDLKTKKIKD LADEFVPNKE NYTNDATMVG HGFTITYDML
NNLSKKPTKK QKSGWASRFG FSKN