| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1752 |
|---|
| Symbol | |
|---|
| ID | 5774065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1602341 |
|---|
| End bp | 1603135 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641317407 |
|---|
| Product | precorrin-3B C17-methyltransferase |
|---|
| Protein accession | YP_001583086 |
|---|
| Protein GI | 161529260 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1010] Precorrin-3B methylase |
|---|
| TIGRFAM ID | [TIGR01466] precorrin-3B C17-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTGGAA AATTGAATAT TGTTGGTGTT GGTCCTGGAC ATAATGATCA TATGACATTT
AGAGCTAAAG AAATAATTCG TGAAAGTGAT ATCATTATTG GTTATGAAAC ATATGTAAAT
CTAGTTTCAG ATCTAATTGA AGGAAAAACA GTTTATCGTT ATGCAATGAC TCAAGAAGTT
GAAAGAGCTC ATCAATGTAT TGACCTTGCA AAGTCAGGAA AAATTGTCTC TCTTGTATCA
AGTGGAGACC CTGGAATTTA TGGGATGGCT GGACTAATCT ATGAAACTTT AGCCGAAGGT
GGTTGGGATC CAAAAGATGG ACTACAAGTA GAAGTGGTTC CAGGTGTGTC TGCACTAAAT
TCCTGTGCAT CTATTGTTGG CTCACCACTA ATGTCTGATT TTGCAGTAGT AAGTATGAGT
GATTTGTTAG TTCCATGGAA AGTTATTGAA AATAGGGTAG AGTCTGCAGC AAAAGGTGAT
TTTGTTCTTG TAATTTACAA TCCTGCTAGT AAGAAAAGAG TCCATCAATT ACAAGATACT
AGAAAAATTC TATTAAAATA TAGAAAACCT ACAACACCTG TTGCAATTAT TGTTGGTGCA
TATAGAGAAT CTGAATCAAT TGTAATAACT GATTTAGAAA ATCTACCAAA TCATTCAGAC
AAGTTAGGAA TGACTAGTAC TGTAATAGTG GGTAATTCAT CAACATATTC TTACAAAGAT
TTGATGATAA ATCCAAGAGG ATACAAATCA AAATACAATT TAGAAGAACA GACTAATCCA
GATCTTAAAG TTTAG
|
|---|
| Protein sequence | MTGKLNIVGV GPGHNDHMTF RAKEIIRESD IIIGYETYVN LVSDLIEGKT VYRYAMTQEV
ERAHQCIDLA KSGKIVSLVS SGDPGIYGMA GLIYETLAEG GWDPKDGLQV EVVPGVSALN
SCASIVGSPL MSDFAVVSMS DLLVPWKVIE NRVESAAKGD FVLVIYNPAS KKRVHQLQDT
RKILLKYRKP TTPVAIIVGA YRESESIVIT DLENLPNHSD KLGMTSTVIV GNSSTYSYKD
LMINPRGYKS KYNLEEQTNP DLKV
|
|---|
| |