Gene Nmar_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1748 
Symbol 
ID5774108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1599007 
End bp1600140 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content32% 
IMG OID641317403 
Productglutamine--scyllo-inositol transaminase 
Protein accessionYP_001583082 
Protein GI161529256 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGTA ATTGTCTTTA TACACTAGTA CTAAGGACAA AATTTGTGAA AATTCCAATT 
AACACACCTA TTTTAGGCAA AGAAGAACTT TCAGCCGTAG TCTCAGTAGT AAAATCAGGC
GGACTCACTT CTGCCTCAAA AGATGGAGGA AAAAATGTAC AGGAATTTGA AAAATCAATC
AGATCTTTTG TTAAAACTAA ATACGCTGTT TCAGTAAATA CTGGTACTGC TGCATTACAA
GCAGCACTAT ATGCACTTGA TATCAAAAAA GGAGATGAAG TAATTGTTCC TTCTTTTACA
TTTGTTGCTA GTGCAAATGC TATTGCTTCT ACTGGTGCAA AACCTGTTTT TGCAGACATT
TTAAAAGAGA ATTTTACAAT TGATCCCGAA TCCATTACAA AAAAAATCAC TAGAAAAACC
AAAGCAATAA TGCCAGTACA CTTGTATGGT CATATATCGT CACTTGATAG AATTAAAGAA
ATTGCAAAAA AACATAATCT TTCAATAATT GAGGATGCTG CACAGTCACT TGGTTCTACG
TTAAAAGGAA AACAAACTGG AACATTTTTT GAACTTGGGT GTTATAGTTT GTATCCTGGA
AAAGTTATTA CTTCTGGCGA AGGTGGTGTT ATAGTTACTA ATAGTAAAAA ACTCTATGAG
AAATTACAGA TGATTAGAAA TCATGGAATG GTTAAAGGAT ACGATTCTAA AATATTTGGA
TTAAATCTGA GACTGCCTGA AATTAATGCA GCAATAGCTA AAATCCAAAT TAAAAAATTA
CCAAAGTTTA TTCAATCAAG AAGATGTAAT GCAAAATTAC TATCTGATTT ATTATCTGAT
ACAAAAATAA AAATTCCTAT TGAGGGAAAA AATGAAAAAT TCAACTGGGG ATTGTACACC
ATCACTACAC AAAATAGAGA TTCGATTTTG AAGAAATTAA ACTCAAAAGG AATTGGGGCT
GCAGTCTATT ATCCAATACC AGTTCATAAA ATTCCTATCT ACAAAATAAA ATCAAAATTA
ACAAATACTG ATTGGGCATC AAAACATGTT CTGTCATTAC CTGTTCATCC AAACGTGTCT
GCCAAAAATG TTGAATATAT CGCAAAAACT GTGCGTGATT TAGTAAATGA ATAG
 
Protein sequence
MRSNCLYTLV LRTKFVKIPI NTPILGKEEL SAVVSVVKSG GLTSASKDGG KNVQEFEKSI 
RSFVKTKYAV SVNTGTAALQ AALYALDIKK GDEVIVPSFT FVASANAIAS TGAKPVFADI
LKENFTIDPE SITKKITRKT KAIMPVHLYG HISSLDRIKE IAKKHNLSII EDAAQSLGST
LKGKQTGTFF ELGCYSLYPG KVITSGEGGV IVTNSKKLYE KLQMIRNHGM VKGYDSKIFG
LNLRLPEINA AIAKIQIKKL PKFIQSRRCN AKLLSDLLSD TKIKIPIEGK NEKFNWGLYT
ITTQNRDSIL KKLNSKGIGA AVYYPIPVHK IPIYKIKSKL TNTDWASKHV LSLPVHPNVS
AKNVEYIAKT VRDLVNE