Gene Nmar_1747 details

Gene Information

• Locus tag: Nmar_1747
• ID: 5773211
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 1598547
• End bp: 1599014
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 641317402
• Product: tetrahydromethanopterin S-methyltransferase subunit A
• Protein accession: YP_001583081
• Protein GI: 161529255
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4063] Tetrahydromethanopterin S-methyltransferase, subunit A

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 46
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATAGCC TTGGAAACAT TATTGGAGAA ATTTGTAAGG TTGTTCTGCC TATAAAACAG 
GAATTTTATC TTGGAAATCC CAATTCACAA ATTGCAATAT GCACACTTGC AAGCATCTCT 
CTACTTGATG ATTTGAAGGA TTCAGAATTA TTGTCTAAGG TGGCAATTAT TGGAAGACTA 
TTTTCAGAGA ATAAGGGAAT TGATAGTATG ATACAGTATG TTTATGAAAA CAAGAATATA 
ACAAAAATAA TTCTTTGTGG GAAAGAAGTT TGGGGTCATA AATCTGGTCA TTCATTATTA 
CAATTACACA AAAATGGAAT TGATAAAAAT TCTAGAATAA TTAATTCAGT TAGTCCAGAT 
CCTTATCTTA CAGTTTCTAA AGATATGATA GAATATTTTC AAAAAAATAT TTCAATTGTT 
GATTTGATTG ATGAAACTAA TCTTGAAGTA ATTTCTAAAA AACTATAA 

 

Protein sequence

MNSLGNIIGE ICKVVLPIKQ EFYLGNPNSQ IAICTLASIS LLDDLKDSEL LSKVAIIGRL 
FSENKGIDSM IQYVYENKNI TKIILCGKEV WGHKSGHSLL QLHKNGIDKN SRIINSVSPD 
PYLTVSKDMI EYFQKNISIV DLIDETNLEV ISKKL