| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1733 |
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| Symbol | |
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| ID | 5773739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1589437 |
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| End bp | 1590453 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 641317387 |
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| Product | RNA-3'-phosphate cyclase |
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| Protein accession | YP_001583067 |
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| Protein GI | 161529241 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG0430] RNA 3'-terminal phosphate cyclase |
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| TIGRFAM ID | [TIGR03399] RNA 3'-phosphate cyclase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.254233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTTTT TAAAAATTAA TGGAGCACAT GGTGAAGGAG GAGGACAAAT AATTCGTTCT
GCAATTACTC TTTCATGTAT TACAAAACAA CCAATTCACA TTGAGAATAT TAGGAAAAAT
AGAAAAGTTT CTGGATTAAA ACCTCAACAT CTTACAGCAA TTAAAATTCT AAAAAAAATT
TCAGATTGTA AAGTAATTGG TGATGAAATT GGTTCTACGG AATTAAAATT CATTCCAGGA
GAAATTAAAA GTTCAAAATT ATCTGAAGAT GTAGGAACAG CAGGAAGTAT TTCACTAATT
TTACAAGTTT TAATTCCAAT AGTAGCAATA TCACAAAAGA ATCTTGAGAT TTCAATCAAA
GGTGGTACAG ATGTACAATG GAGTCCAACA ATGTTCTATA CACAACATAT TTTGAGAGAA
GTATATTCAA GAATGGGGAT TAATTTTTCA TTTGAATTAA AGAAGAGGGG ATACTATCCA
AAAGGAAATG GAGAAGTTAA TTTAGAAATT AATCCATCAA ACGTTAAAGC AATTTCATTA
TCAAAAAGAA AAACAAATCG GGTAAAAATT CTATGTACAT TTTCAAAAAT TCCAAATGAA
AAAATTGAAA GTGAAATTAA AAAAATTAAA GAAAAACTAA ATGAAAGTTT TGTTGTTGAC
GTAGAAATCA AAGAAGAAGC ATTAGACTCT GGTGCGTCTT TATTAGTTTA CAGTATTGAT
GAGAATTCAA TTATAGGAAT TGATTCATTA TTTGATAAAA AAATAGAGAG TTTTGACGTA
GATCTTGATG GATTTTTAGA AGATATAGCA GTGGATGAGA ATCTGGCAGA CATGATTGTA
GTTCCAGCAA GTGTGGCCAA AGGCAAGACA ATCTTTCAAG TCAAAAAAAT TACAAAACAC
TTGGAAACCA ACTTGTTTGT AACATCAAAA ATTTCTGGTT GCAAATATGG AATAGGCAAA
TTACCTAATG GTTTTGAAGT AATTATTGAA GGAACATCAT ACTCCAGCAT CAAGTAA
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| Protein sequence | MDFLKINGAH GEGGGQIIRS AITLSCITKQ PIHIENIRKN RKVSGLKPQH LTAIKILKKI
SDCKVIGDEI GSTELKFIPG EIKSSKLSED VGTAGSISLI LQVLIPIVAI SQKNLEISIK
GGTDVQWSPT MFYTQHILRE VYSRMGINFS FELKKRGYYP KGNGEVNLEI NPSNVKAISL
SKRKTNRVKI LCTFSKIPNE KIESEIKKIK EKLNESFVVD VEIKEEALDS GASLLVYSID
ENSIIGIDSL FDKKIESFDV DLDGFLEDIA VDENLADMIV VPASVAKGKT IFQVKKITKH
LETNLFVTSK ISGCKYGIGK LPNGFEVIIE GTSYSSIK
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