| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1720 |
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| Symbol | |
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| ID | 5773568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1577101 |
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| End bp | 1577940 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641317374 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001583054 |
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| Protein GI | 161529228 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0486362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCATAAAT CAGTACAAGA TATTGTAAAT ATGAAAAAAG GAAAAAAGAA AGTTTCAGTA
ATTACAGGTT ATGATTACAC ATTAGCATCA CTGTGTGACA AGGCAGGCAT TGATGTCTTG
TTAGTTGGAG ATAGTGCAGG AATGGTAATG CTTGGGTATG AGAATACAAT TCCTGTAACA
ATGGATCAAA TGTGTATGTT CACTGAGGCA GTTAGCAGAG CACGAAACAA TGCATTACTA
GTTGCAGATT TACCATTCAT GTCATATCAA GCAAGTATAG AAGATGCGAT AAACAACTCA
GGTAAGTTAA TCAAAGCAGG AGCTGATGCT GTAAAGTTAG AAGGTGGTTC AATTATGGCT
GAAACAATTA GTGCAATTGT TGATGTTGGA ATCCCTGTGA TGGGACATAT TGGATTACAA
CCACAAACAA CAATGCTTTC ACAAGGTTAC AAAGTACAAG GAAGAACAAA AGATTCTGCA
ATGCAGTTAA TTCAAGATGC AAAGGAGCTT GAAGAAGCAG GAGTGTTCAG TATTGCATTA
GAGATGGTAA GTCATGAAGT TGCACAAATA ATTTCTGAAA CTGTAAGTGC TCCTACAATT
GGAATTGGTT CAGGAGTAAA TTGTGATGGA CAAGTACTAG TGGTTCAAGA TTTGCTTGGA
ATGTACGATA AGATAAAACC AAAATTTGCA AAAAGATACA TGAATCTATC TGAAGACATT
GTAAAATCCC TTGAAGACTA CAAAAATGAC GTAGAATCAA ACACATTTCC TGCAGAAGAA
AATTGGTTTT CAATGGATCC TGAAGAACTA AAAAAATTAC GTGAGCAGAT TGGCAGCTAA
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| Protein sequence | MHKSVQDIVN MKKGKKKVSV ITGYDYTLAS LCDKAGIDVL LVGDSAGMVM LGYENTIPVT
MDQMCMFTEA VSRARNNALL VADLPFMSYQ ASIEDAINNS GKLIKAGADA VKLEGGSIMA
ETISAIVDVG IPVMGHIGLQ PQTTMLSQGY KVQGRTKDSA MQLIQDAKEL EEAGVFSIAL
EMVSHEVAQI ISETVSAPTI GIGSGVNCDG QVLVVQDLLG MYDKIKPKFA KRYMNLSEDI
VKSLEDYKND VESNTFPAEE NWFSMDPEEL KKLREQIGS
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