Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1714 |
Symbol | |
ID | 5773311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1571629 |
End bp | 1572816 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641317368 |
Product | hypothetical protein |
Protein accession | YP_001583048 |
Protein GI | 161529222 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0633161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAATACC GATTACGATT AGCCAAAAGA ATGCTATTCA ACAAAAAAGG AAGCTTGATT GGTGCAGTTC TAGCTGTTAC TATCGGAATT TTAGTAATTC ATGTAAATTT TGTAATTTTC CAAGGATTGT TTGATGCAAT TGTCAGAGAT ATCAGTGATT ACAGAAATGG TGACATTCTT GTAACTGATG AGGCAGACTA TATAGATAAA TCAGATTTAT CTGTTGTAAA TTGGTTTGAA AGAATTCCAT ATGTAGAGGC GGCAACACCG CGGCTTTCAT CAACTGCCGA AATGAATATG ACAAAAAATG GAAAACTAGT TGAAGAAACA AGAGTTCCTA TAGTTGGAAT TGATCCATTT AGAGATATTA GAGCATCAAC TGTTCATGAA ACTGTTTCAG AAGGAAGTTA TGTTTTTTCA AGAAACTCTA TTGTATTAGG TTCTAATGTT GCAAGAGATC TTGGAGGAGC TGAAGTTGGT GACAGTGTCA AAGTTCTAGT AGTAGACAGA TATGGACAAG ATGAAATAAG AAGATTTACT GTTTCAGGAA TTGCAAAATC TCCTGGAGGT CAAGGATTTG ACTATACTGC AGTTATTCAT ATTGATACAT TACGTGACAT GATGAATAGA CAAGGTGATA CAGGATCATT TATGGTAAAA CTAAATGATC CCACAAAAGC ATTTGAAGTA AAAGAATTTT TCTTACGTTC ATTTCCAAAT GATGATTTTA AAGCTGAAAC AATAGAAGAG TCAGCTGAAG AACAACTAGC TGGATTTAGA TCTGGTATTG CAATGATTAA CATGATTGGT TATTTTGGAA TGATGTCTTC AGCTTTTGCT ATTGTAACAA TTCAAATGAT GTTGGTAAAT GGAAAAACCC GTGAAATCGG TGTAATGAGA TCTATTGGAG CAAAAAGAAA GGATATTTTG ATTATCTTTA TTTTCCAAGG AATGATTATT GGAGCTATTG GTGCTGGTGT AGGTACGGCT GCAGGCTTGG GATACACATT CTATGCAAAG GAAACTAAAA TGTCATTTAA CAATAGTTTG CCTCTTGAAG TTACCTATAA CTGGGAGAAG ATCATCCAAA CTGCTTTAAC TTCATTTATT TTGGCAATTA TTGCGTCACT CTATCCGTCG TATAGGGCTA CAAAGCTATT ACCAGTGGAG GCGATGAGAA CTGTCTAA
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Protein sequence | MEYRLRLAKR MLFNKKGSLI GAVLAVTIGI LVIHVNFVIF QGLFDAIVRD ISDYRNGDIL VTDEADYIDK SDLSVVNWFE RIPYVEAATP RLSSTAEMNM TKNGKLVEET RVPIVGIDPF RDIRASTVHE TVSEGSYVFS RNSIVLGSNV ARDLGGAEVG DSVKVLVVDR YGQDEIRRFT VSGIAKSPGG QGFDYTAVIH IDTLRDMMNR QGDTGSFMVK LNDPTKAFEV KEFFLRSFPN DDFKAETIEE SAEEQLAGFR SGIAMINMIG YFGMMSSAFA IVTIQMMLVN GKTREIGVMR SIGAKRKDIL IIFIFQGMII GAIGAGVGTA AGLGYTFYAK ETKMSFNNSL PLEVTYNWEK IIQTALTSFI LAIIASLYPS YRATKLLPVE AMRTV
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