| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1689 |
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| Symbol | |
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| ID | 5774539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1548095 |
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| End bp | 1548724 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641317343 |
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| Product | V-type ATPase, D subunit |
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| Protein accession | YP_001583023 |
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| Protein GI | 161529197 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1394] Archaeal/vacuolar-type H+-ATPase subunit D |
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| TIGRFAM ID | [TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.366516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATTTG GACAAAATGT TGCTGCAACA AAAATTGAAC TTTTCAAATA CAAAAAATCT
AGTCAAGTAG CCGTAATGGT GCAGAAAATT CTAGATGACA AGCGTAAAGT TCTCCTAAAA
AACATCGAAG AGATGATTGA AGAAGCCTCA AAAGCTAGAG GTGGAATATG GGAACCGCTC
CAAGACATCT ACAGTTCTGT AAATGAAGCA TACTTGGCAT TAGGTTCTTC AACTGTAGAC
TCTGTTGCCG AATCCACTCC TTCAGTAATG GAAGTAGATG TAAATGTCAG AAGAGTCGTT
GATGTAAAAA TTCCTGCACT ATCTGTTACT GAAAAAGATA CAAAATCAAT GCCATATGGT
TTTGCTGATA CAAACTCTTC AATTGATAGA GCAGCAAAAC AGATCAAAGA GCTTTTGCCA
AAAATCTGTA AAGCCGCAGA ATATGAAAAT TCAATTTTCA GTCTTGCAAA AGCATTAGAA
AAAACTCAGA AATTACTAAA CGCACTTGAA AACGTCATTA TTCCTCAGTA TCAACAAAAA
GTAAGATTCA TCATAGCCAC TCTTGAGGAA AGAGAAAGAG AGGAATTCGC AAAGTTAAAA
AAAGTGAAGG CTAAGATGGA GAGTAGATAA
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| Protein sequence | MSFGQNVAAT KIELFKYKKS SQVAVMVQKI LDDKRKVLLK NIEEMIEEAS KARGGIWEPL
QDIYSSVNEA YLALGSSTVD SVAESTPSVM EVDVNVRRVV DVKIPALSVT EKDTKSMPYG
FADTNSSIDR AAKQIKELLP KICKAAEYEN SIFSLAKALE KTQKLLNALE NVIIPQYQQK
VRFIIATLEE REREEFAKLK KVKAKMESR
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