Gene Nmar_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1654 
Symbol 
ID5773762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1513955 
End bp1514677 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content33% 
IMG OID641317308 
ProductABC transporter-like protein 
Protein accessionYP_001582988 
Protein GI161529162 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGAAAG CAGTTGAAAT AAGTAACCTT TCAGTTCAAT ATCCTGACGT AAAAGCTCTT 
GATGATGTCA GTTTTGTGGT TAATCAAGGT AATTTTCTAG GCATAATTGG CCCAAATGGC
GCTGGAAAAT CCACTCTTTT TGATTGCATG CTTGGTCTCA ATACAAAGTA CAAAGGTGAA
ATCAAATTTT TTGATAAGGA TATCAGAATT TCAAAAAATT ATCTTAAAGA AATTGGATAT
GTTCCCCAAA AACCAATTTT TGAAAAAAAT TTTCCGGCAA CTGTTACTGA TGTTGTTAGG
ATGGGACTGA GAAATGAATC TGATGAAAAT AAAATTAATG AAATTTTGCA ACAATTGTGG
ATACATGAAC TCCGAAATAG AAGAATAGGA GAATTATCAG GAGGACAACT ACAACGAGTC
TTTATTGCAA AAGCTTTGGT AAATAATCCA AAACTTTTGA TTTTAGATGA ACCGATTACA
GGAATTGATC AGCAAAGTAT AGAATTATTC TACAGTATCT TACGTGAACT AAACTCTAAA
CAAAAAATTA CAATCATTTG GTCTTCTCAT GATTTGGATG CAGTAAACCA ACTAGCTAAT
CATGTTGCTT GTCTTAACAG AACGTTATTC TTCCATGGAG AATCTGAAAA ATTCTTCTCT
GATGATGAGC TTGTCAAACA GTATTCTGAA GCATCTATGC AGGAGCATAT GCATCATCAT
TAA
 
Protein sequence
MLKAVEISNL SVQYPDVKAL DDVSFVVNQG NFLGIIGPNG AGKSTLFDCM LGLNTKYKGE 
IKFFDKDIRI SKNYLKEIGY VPQKPIFEKN FPATVTDVVR MGLRNESDEN KINEILQQLW
IHELRNRRIG ELSGGQLQRV FIAKALVNNP KLLILDEPIT GIDQQSIELF YSILRELNSK
QKITIIWSSH DLDAVNQLAN HVACLNRTLF FHGESEKFFS DDELVKQYSE ASMQEHMHHH