Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1654 |
Symbol | |
ID | 5773762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1513955 |
End bp | 1514677 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641317308 |
Product | ABC transporter-like protein |
Protein accession | YP_001582988 |
Protein GI | 161529162 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGAAAG CAGTTGAAAT AAGTAACCTT TCAGTTCAAT ATCCTGACGT AAAAGCTCTT GATGATGTCA GTTTTGTGGT TAATCAAGGT AATTTTCTAG GCATAATTGG CCCAAATGGC GCTGGAAAAT CCACTCTTTT TGATTGCATG CTTGGTCTCA ATACAAAGTA CAAAGGTGAA ATCAAATTTT TTGATAAGGA TATCAGAATT TCAAAAAATT ATCTTAAAGA AATTGGATAT GTTCCCCAAA AACCAATTTT TGAAAAAAAT TTTCCGGCAA CTGTTACTGA TGTTGTTAGG ATGGGACTGA GAAATGAATC TGATGAAAAT AAAATTAATG AAATTTTGCA ACAATTGTGG ATACATGAAC TCCGAAATAG AAGAATAGGA GAATTATCAG GAGGACAACT ACAACGAGTC TTTATTGCAA AAGCTTTGGT AAATAATCCA AAACTTTTGA TTTTAGATGA ACCGATTACA GGAATTGATC AGCAAAGTAT AGAATTATTC TACAGTATCT TACGTGAACT AAACTCTAAA CAAAAAATTA CAATCATTTG GTCTTCTCAT GATTTGGATG CAGTAAACCA ACTAGCTAAT CATGTTGCTT GTCTTAACAG AACGTTATTC TTCCATGGAG AATCTGAAAA ATTCTTCTCT GATGATGAGC TTGTCAAACA GTATTCTGAA GCATCTATGC AGGAGCATAT GCATCATCAT TAA
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Protein sequence | MLKAVEISNL SVQYPDVKAL DDVSFVVNQG NFLGIIGPNG AGKSTLFDCM LGLNTKYKGE IKFFDKDIRI SKNYLKEIGY VPQKPIFEKN FPATVTDVVR MGLRNESDEN KINEILQQLW IHELRNRRIG ELSGGQLQRV FIAKALVNNP KLLILDEPIT GIDQQSIELF YSILRELNSK QKITIIWSSH DLDAVNQLAN HVACLNRTLF FHGESEKFFS DDELVKQYSE ASMQEHMHHH
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