Gene Nmar_1653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1653 
Symbol 
ID5773376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1513134 
End bp1513952 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content34% 
IMG OID641317307 
ProductATP-binding domain-containing protein 
Protein accessionYP_001582987 
Protein GI161529161 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTG AAATTCTAAC CTATAGTTTT ATGCATAGAG CATTAATTTC TGGAATTGCT 
ATTGCAATTC TTTGTTCGGT TGTAGGATTG TTCTTAGTTC TTAGACGTTA TTCTCTATTT
GGTGATGCAA TAGCACATTC ATCTTTTGGT GGAATTGCAT TAGGTCTTTT GGCAGGAGTC
TATCCATTAT GGACAGCATA TGGCGTATCA ATTGTCAGTG CATTAATCAT TACAAGAATC
AAAGACCGAT TCAACATATC AGGTGATGCA TCAATAGCAG TACTTTTGTC CTCAGGTATA
GCAGTTGGGC TCGTAGTTAT TGGATTATCC GGGGGATTTA CAATTGATAT CTTTAGTTTT
CTCTTTGGTA GTATTCTACT TGTCAGTGTT GATGACACAG TTTTGATACT TGCTCTTACT
GGTGCAATTC TAATTGTGCT ATTGGTGTTG TATCGTCAGA TTCTTTATTC TACATTTAAT
GAAGAACAAG CTAAAGTTAG CGGAATTCCT GTAGAAAAAA TAAATTACCT TATAGTGTTT
ATGGCAGGAA TTACTGTTGT TACTTCAATT CAACTTGTTG GTGTTTTATT AATTTCTGCC
CTATTTGTAA TTCCTAATGT ATCCGCAATA ATGTATGGTA AGGGTTTCAA ACAAACTGCA
ATTATTTCTA TGAGTTTTTC AATTTTCTCA GTTGTTACAG GAATTTTAGT TTCTTACATC
TTTGATATTA CTCCTGCAGG AACGATTGTT TTGATCTCAA TTGGATTACT AGCTAGTACC
ATGGGAATAA AATCTGTTGG ACTACTTTCT AAGAATTAA
 
Protein sequence
MSFEILTYSF MHRALISGIA IAILCSVVGL FLVLRRYSLF GDAIAHSSFG GIALGLLAGV 
YPLWTAYGVS IVSALIITRI KDRFNISGDA SIAVLLSSGI AVGLVVIGLS GGFTIDIFSF
LFGSILLVSV DDTVLILALT GAILIVLLVL YRQILYSTFN EEQAKVSGIP VEKINYLIVF
MAGITVVTSI QLVGVLLISA LFVIPNVSAI MYGKGFKQTA IISMSFSIFS VVTGILVSYI
FDITPAGTIV LISIGLLAST MGIKSVGLLS KN