| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1639 |
|---|
| Symbol | |
|---|
| ID | 5773551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1496471 |
|---|
| End bp | 1497802 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 641317293 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001582973 |
|---|
| Protein GI | 161529147 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAA AAATCAGTTC ATTATTTGCA ATCACTGTCC TCTTACTTGT AATTTCACTC
CAAAATCCTG TTTTTGGAGA TGATTCTGAG CCTAGCATAT TCCCTGATTG GGTAAGACAG
ACTACTTCTA TCTGGATAGA TGGGCAAATG TCTGATTCTG AATTTTTAGC ACTAATTCAA
AACATTCTTG ATAAAAATAT CATACCTGAT GAAATAAAAT CACAAGAAAT TCTAATCAAT
ACTGCAAAAA CTGTAATTCA AGATATTCCC GAATTATACG AAGAAAAGAC TTTAGAATTA
ATTCCATATT GGGTTAAAGA TAGAGCAGAA TGGTGGATTG ATGGAAAAAT AAGTGATTTA
CAATTTCTTA GAACAATTCA TTACTTGAGA GAAGTTGGGT ATCTAGAATA CAACCCCGAG
CAAAGTATCT TTTCAAATGA TGAAACATTC CAATCAAGTC TTGAAAAATA TTTGTTAAAT
GATAAAGAAA TTTTGAATAT TACAAAAGAG ACAAAGTGGA GAACATTTTC AACTGAATAT
GAATTTGAAG AAAAAGAAGG TGTTGTAGAT TCTGTCAAAA TTATTTTCAA TGACATTACT
AGAGTATACG AACCAATTTT TTACAAATTC AAAGTACCTA CATTAACAAT GCAAATAATT
GAATTTAACA ACAAAAATGA TTTAGATGAC TATTGGAATT CTTTTGAAAA TAAAGACAAA
GTATTCGAAT CTGCATATCT TAGTGGAAAC CCAAATGAAA ATTCTGAATG TTTGTTTAAC
TATACTTCAA AGGGTGGATT AACATCATGC ATTTATGAAA ATTTCATAAT ACATGTTATC
ATATTTGATC AACATAATGA ACACTACAAT TATGATGTCT CTGATCTAAT CTTAGATGAA
ACCGAGCCTA CAACTAGATT TATGAGTGAA ATTCTAAAAA AAATTGCGTA TTTCAATAAT
GATCACATGA GTTCTCAATT ACATCATATT TTACAAAAAG ATATTCAAGA AAATATTTCC
CAAGACTCTT CTAATCCAAT TCAAACTGTA CCGAAATCTA TTGAACCAGA AAAATCTGCA
ATTCAAGGTG TAGAAAATTT TTCATGTATA CGTGATGATT TTGGACTAGT AACAATTTCT
GGTCAATATC ATAATGATCA TCTAAAGCGA CCTCAAGTCG AACTCTCAAT ATCTTTTTTG
GATGCCAAGG GAAACACAGT TGGTAAAACT AGTACTACAT TTACTGACCT GCAAGAATTT
GAGTCAAAAA GATTTGTAGG TCATTCAAAA TGGAGTGAAC ATTTCCATTC CTGTCACGTT
GAGGTCAAAT AA
|
|---|
| Protein sequence | MNLKISSLFA ITVLLLVISL QNPVFGDDSE PSIFPDWVRQ TTSIWIDGQM SDSEFLALIQ
NILDKNIIPD EIKSQEILIN TAKTVIQDIP ELYEEKTLEL IPYWVKDRAE WWIDGKISDL
QFLRTIHYLR EVGYLEYNPE QSIFSNDETF QSSLEKYLLN DKEILNITKE TKWRTFSTEY
EFEEKEGVVD SVKIIFNDIT RVYEPIFYKF KVPTLTMQII EFNNKNDLDD YWNSFENKDK
VFESAYLSGN PNENSECLFN YTSKGGLTSC IYENFIIHVI IFDQHNEHYN YDVSDLILDE
TEPTTRFMSE ILKKIAYFNN DHMSSQLHHI LQKDIQENIS QDSSNPIQTV PKSIEPEKSA
IQGVENFSCI RDDFGLVTIS GQYHNDHLKR PQVELSISFL DAKGNTVGKT STTFTDLQEF
ESKRFVGHSK WSEHFHSCHV EVK
|
|---|
| |