Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1624 |
Symbol | |
ID | 5774627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1478794 |
End bp | 1479246 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641317277 |
Product | 30S ribosomal protein S19e |
Protein accession | YP_001582958 |
Protein GI | 161529132 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2238] Ribosomal protein S19E (S16A) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGG TATACGATGT ACCAGCAGAT GTATTGATAG GAAAGCTAGC TGAGATCCTA AAAAATGAAG ATATTCCAGC TCCTTCTTGG ATTCCATTTG TAAAAACTGG AGCTCATGCT GACAAACCAC CACAAAACCG TGATTGGTGG CATACTAGAT GTGCTTCAAT TATGAGAAAA ATTTACCTTC ATGGTCCAAT TGGAATTAAC GAATTAAGAA AAGATTATGG TGGCGGTAAA CCATCTGGTT ATGGTGCAGC TCATCACAAA GACGCTGGCG GTGCAATTAT TAGAAATGCC ATCCATGGAC TAGAGAAATT AGGTTACTTG GAGAAGGTTG AGAAGAAAGG ACGTATAGTT TCTAAACAAG GTATGCAAAA ACTTGACAGA TTAGCAACAG AAATTCTAAA AGAAATGATT GTTGAAAATC CTCAATTGAA AGTTTACACT TAG
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Protein sequence | MAKVYDVPAD VLIGKLAEIL KNEDIPAPSW IPFVKTGAHA DKPPQNRDWW HTRCASIMRK IYLHGPIGIN ELRKDYGGGK PSGYGAAHHK DAGGAIIRNA IHGLEKLGYL EKVEKKGRIV SKQGMQKLDR LATEILKEMI VENPQLKVYT
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