Gene Nmar_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1624 
Symbol 
ID5774627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1478794 
End bp1479246 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content38% 
IMG OID641317277 
Product30S ribosomal protein S19e 
Protein accessionYP_001582958 
Protein GI161529132 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2238] Ribosomal protein S19E (S16A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG TATACGATGT ACCAGCAGAT GTATTGATAG GAAAGCTAGC TGAGATCCTA 
AAAAATGAAG ATATTCCAGC TCCTTCTTGG ATTCCATTTG TAAAAACTGG AGCTCATGCT
GACAAACCAC CACAAAACCG TGATTGGTGG CATACTAGAT GTGCTTCAAT TATGAGAAAA
ATTTACCTTC ATGGTCCAAT TGGAATTAAC GAATTAAGAA AAGATTATGG TGGCGGTAAA
CCATCTGGTT ATGGTGCAGC TCATCACAAA GACGCTGGCG GTGCAATTAT TAGAAATGCC
ATCCATGGAC TAGAGAAATT AGGTTACTTG GAGAAGGTTG AGAAGAAAGG ACGTATAGTT
TCTAAACAAG GTATGCAAAA ACTTGACAGA TTAGCAACAG AAATTCTAAA AGAAATGATT
GTTGAAAATC CTCAATTGAA AGTTTACACT TAG
 
Protein sequence
MAKVYDVPAD VLIGKLAEIL KNEDIPAPSW IPFVKTGAHA DKPPQNRDWW HTRCASIMRK 
IYLHGPIGIN ELRKDYGGGK PSGYGAAHHK DAGGAIIRNA IHGLEKLGYL EKVEKKGRIV
SKQGMQKLDR LATEILKEMI VENPQLKVYT