| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1623 |
|---|
| Symbol | |
|---|
| ID | 5773061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1478505 |
|---|
| End bp | 1478786 |
|---|
| Gene Length | 282 bp |
|---|
| Protein Length | 93 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641317276 |
|---|
| Product | DNA-binding TFAR19-related protein |
|---|
| Protein accession | YP_001582957 |
|---|
| Protein GI | 161529131 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2118] DNA-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTC CTGAATCAAA CGATCAACCT CAAGACAATA CAAATCACGA ACTAGCTGCA
CAAAAAGAAC AGATTCTAAA ACAAATCCTA GTTCCTGAAG CAAGAATGAG ATTAAACAAT
ATCAAAATGG TAAAACCAGA ACTGGCTGAT TTAGTTGAAC AATATTTGAT AGGAATGGCA
ACTCAGGGAA AAATCCCTGG ACAAATTACA GACGATCAAC TAAAGCAAAT TTTACTTTCA
ACCCAACAAC CAAAACGTGA ATTTAAGTTT AATCGTGTCT GA
|
|---|
| Protein sequence | MSFPESNDQP QDNTNHELAA QKEQILKQIL VPEARMRLNN IKMVKPELAD LVEQYLIGMA
TQGKIPGQIT DDQLKQILLS TQQPKREFKF NRV
|
|---|
| |