| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1617 |
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| Symbol | |
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| ID | 5773483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1473902 |
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| End bp | 1474495 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641317270 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_001582951 |
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| Protein GI | 161529125 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTTTGA TGTTTACCGG AATTGTTAAA GGAATAGGTA AAGTAGAAAA AATTTCTAAA
AATACAAAAA ATCGAAGTGC AGTACAGATG ACTGTAAATC TTGGTAAACA TGCAAAGGGA
TTGAAAATTG GACAAAGTGT TGCCCTAAAT GGTGTGTGTC TTACTGCAAC AAAACTATCA
AAATCTAGTT GTATATTTGA GATGATTGAA GAAACAACAA AGAAAACTGA TCTTGGTAAT
CTTGAGGTTG GTGGAATAGT GAACATTGAA CGAAGTTTAA AGGCTGGAGA TAGACTAGAA
GGTCATTTTG TTTTAGGACA TGTGGATGGT GTAGGAATAA TTAAAAAAAT TCAAAAAAAA
CCCAAAGAGG TTCAAGTTTG GTTTGAAGTA CCTAAAAAAT TGGCAAAATA TGTAGTCAAA
AAGGGTTCTA TTGCAGTTGA TGGAATAAGT TTGACAGTAA CTGACATCAA AAAAAATCTT
GCATCTGTTT CATTAATTCC TCATACAATT GAGGTTACTA ATTTTCAAAC AAAAAAAGTA
GGCGACAAAG TTAATATTGA AACTGACATT CTCGGAAAAT ATATTCTAAA ATAA
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| Protein sequence | MILMFTGIVK GIGKVEKISK NTKNRSAVQM TVNLGKHAKG LKIGQSVALN GVCLTATKLS
KSSCIFEMIE ETTKKTDLGN LEVGGIVNIE RSLKAGDRLE GHFVLGHVDG VGIIKKIQKK
PKEVQVWFEV PKKLAKYVVK KGSIAVDGIS LTVTDIKKNL ASVSLIPHTI EVTNFQTKKV
GDKVNIETDI LGKYILK
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