| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1612 |
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| Symbol | |
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| ID | 5773649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1470160 |
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| End bp | 1470816 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 641317265 |
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| Product | deaminase-reductase domain-containing protein |
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| Protein accession | YP_001582946 |
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| Protein GI | 161529120 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAAAT CTAGACCTCA TGTTATTCTA AGTGGAGCAA TATCTGTTGA TGGAAAAATT
GCAACTAAAA CAAACGATTC AAAACTTTCA TCACAAAAAG ATATTCAAAG ACTTCATAAA
TTACGTTCAA GTGTAGATGC AATTCTTATT GGAAAAAATA CCGCATCACG TGATAATCCT
CTCTTGACTG TTCGTCATGT TAAAGGAAAA AACCCTATCA GAATTGTTTT AGATTCTAAA
GGTACTATTT CAAAAACATC AAAAATTCTT CAATCAAGTA ACAAAGTTCC AACGATAATT
GCAATATCTA AAAAAATTAC TAAAAAAAAT CTTGAAAAAC TAGAAAAATT CCCTGTTGAA
ATAATTAGTA CCGGTAATGA TTCTGTGAAT TTAAAATTAC TGTTGAAAAA ACTATCAAAA
AAGAAAATCA AAACAATACT GGTTGAAGGA GGAGGAACTG TAAACTGGGA ATTTGTAAAA
CATAATCTCT TTGATGAAAT GATACTAACG ATATCTCCTT ACTTACTTGG TGGAGAAGAC
TCTATTTCCT ATTTACGAGG TACTGGATTT AGCAGAATTT CTCATTCTCC TAATCTCAGA
CTCAAATCAG TAAAGAGGCT CAAAAATCAT CTAGTTTTAC ATTACGTAAA GCTCTAA
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| Protein sequence | MEKSRPHVIL SGAISVDGKI ATKTNDSKLS SQKDIQRLHK LRSSVDAILI GKNTASRDNP
LLTVRHVKGK NPIRIVLDSK GTISKTSKIL QSSNKVPTII AISKKITKKN LEKLEKFPVE
IISTGNDSVN LKLLLKKLSK KKIKTILVEG GGTVNWEFVK HNLFDEMILT ISPYLLGGED
SISYLRGTGF SRISHSPNLR LKSVKRLKNH LVLHYVKL
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