Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1600 |
Symbol | |
ID | 5774549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1462053 |
End bp | 1462715 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641317253 |
Product | hypothetical protein |
Protein accession | YP_001582934 |
Protein GI | 161529108 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCAAATA TCGATCCCTT ACTTAATTCT CGTATTGGAG TTGCTACTTC CTATGGTAAA CCATACTATA GATTCTCGAC ATATCTAAAA GCTCTCAAAT TATCATTTGA TTCTATTTTG CCTGAAGACA TCCAAAATTA TTCTGGTCAT CTTATTCTTA CCACTCGCAA AGAATCTCCA AAAATCTGTG AAACCCCAAT ACTTCATGAG GATATCTTTG AACATCCTCC AACTGTACTC CGAGGAATAA TGATGCAAAA ACTTAATCTT GATTTTGAAG AAAATGATCT GATTTTAGGA ATTGATCCTG GGGAGAGAAC TGGCTTGTCT GTATTTTACT ATGGAAAAGA AATTGAGAGC TCATTTCATT CCTCTGTTGA AGAATTAGTT GCTCATATCA TTAGAGTTCT TGGAGGTCTT AGAGCAAAAA GAAAGATTGT AAAAATTGGA AATGGCAATA TGGGAATTGC AAAACAAATT GTAACTATGT TAAATCTCAA ATTTTGTTCA TCTTTTGAAT TGGAATTTGT TGATGAAAGA AAGACCAGTA TGAAAATCAA GAATTTCAAT CAGAGAGGAA AACGAGATAT GTTGTCTGCA AAATACATAT CTCAAAGAGA CGGATATAGA CATTCTATAT TGCCTCTCTC TATAACCGGT TAA
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Protein sequence | MSNIDPLLNS RIGVATSYGK PYYRFSTYLK ALKLSFDSIL PEDIQNYSGH LILTTRKESP KICETPILHE DIFEHPPTVL RGIMMQKLNL DFEENDLILG IDPGERTGLS VFYYGKEIES SFHSSVEELV AHIIRVLGGL RAKRKIVKIG NGNMGIAKQI VTMLNLKFCS SFELEFVDER KTSMKIKNFN QRGKRDMLSA KYISQRDGYR HSILPLSITG
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