Gene Nmar_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1600 
Symbol 
ID5774549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1462053 
End bp1462715 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content33% 
IMG OID641317253 
Producthypothetical protein 
Protein accessionYP_001582934 
Protein GI161529108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAAATA TCGATCCCTT ACTTAATTCT CGTATTGGAG TTGCTACTTC CTATGGTAAA 
CCATACTATA GATTCTCGAC ATATCTAAAA GCTCTCAAAT TATCATTTGA TTCTATTTTG
CCTGAAGACA TCCAAAATTA TTCTGGTCAT CTTATTCTTA CCACTCGCAA AGAATCTCCA
AAAATCTGTG AAACCCCAAT ACTTCATGAG GATATCTTTG AACATCCTCC AACTGTACTC
CGAGGAATAA TGATGCAAAA ACTTAATCTT GATTTTGAAG AAAATGATCT GATTTTAGGA
ATTGATCCTG GGGAGAGAAC TGGCTTGTCT GTATTTTACT ATGGAAAAGA AATTGAGAGC
TCATTTCATT CCTCTGTTGA AGAATTAGTT GCTCATATCA TTAGAGTTCT TGGAGGTCTT
AGAGCAAAAA GAAAGATTGT AAAAATTGGA AATGGCAATA TGGGAATTGC AAAACAAATT
GTAACTATGT TAAATCTCAA ATTTTGTTCA TCTTTTGAAT TGGAATTTGT TGATGAAAGA
AAGACCAGTA TGAAAATCAA GAATTTCAAT CAGAGAGGAA AACGAGATAT GTTGTCTGCA
AAATACATAT CTCAAAGAGA CGGATATAGA CATTCTATAT TGCCTCTCTC TATAACCGGT
TAA
 
Protein sequence
MSNIDPLLNS RIGVATSYGK PYYRFSTYLK ALKLSFDSIL PEDIQNYSGH LILTTRKESP 
KICETPILHE DIFEHPPTVL RGIMMQKLNL DFEENDLILG IDPGERTGLS VFYYGKEIES
SFHSSVEELV AHIIRVLGGL RAKRKIVKIG NGNMGIAKQI VTMLNLKFCS SFELEFVDER
KTSMKIKNFN QRGKRDMLSA KYISQRDGYR HSILPLSITG