Gene Nmar_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1596 
Symbol 
ID5773136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1459073 
End bp1459558 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content35% 
IMG OID641317249 
Productthioesterase superfamily protein 
Protein accessionYP_001582930 
Protein GI161529104 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCTG AATCAAATAT TCGAGAAAAG AGTCCTGCTG AATCTCATGC TGAAGTTATT 
GTCAGAATGT TTCCCTCTGA TGCAAATCCA GCTGGAAATG TGTTTGGTGG TGAAATTTTA
AAACACATTG ATATGGTTGC AGGAATTGTT GCCCAAAGAC ATTCTCAATC AAATGCTGTT
ACTGTATGTA TGGATAGTGT AAATTTTCTA AAACCCGTAT TTGTTGGAAA TGTACTTTCA
TTAAATGCTC GCATAAACTA TGTCCACAAT TCTTCTATGG AAATAGAAGT TAAAGCAGAA
GCTGAAGATA TTGTTACGGG AATTAGAACT ACTACTGGAA CTGCTTTTGT AACATTTGTT
GCATTAGATA AAAATGGCAA ACCTTTGCAT GTCCCAAAAC TCTCTTTAAA AACAGATGAA
GACCGAGCCA AATTTGAAGA AGGCAAAATC CGAATGGAAA AGCGATTGCA AAATCGACAA
AAGTAA
 
Protein sequence
MSSESNIREK SPAESHAEVI VRMFPSDANP AGNVFGGEIL KHIDMVAGIV AQRHSQSNAV 
TVCMDSVNFL KPVFVGNVLS LNARINYVHN SSMEIEVKAE AEDIVTGIRT TTGTAFVTFV
ALDKNGKPLH VPKLSLKTDE DRAKFEEGKI RMEKRLQNRQ K