| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1588 |
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| Symbol | |
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| ID | 5773950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1453031 |
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| End bp | 1453960 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641317241 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001582922 |
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| Protein GI | 161529096 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCAAAAAC AAAAGACAGA ATCCAGAGTT GCAGTATATT ATGAATTAAC AAAGCCCAAA
ATTTGGTATT TGTTGGTATT TACCGCATTT GGGGCCGCTT TAACAGCATC TAATATTTAC
GGAATTGAGA TTGCACCTTC CACATGGGCA CTCATGTTAT TTTCAGTTGC CGCAGGTTCT
GCTGCAGCCA ATACTTTGAC AAATTATCAC GATAGAGATA TCGACGCAAT AATGGAGAGA
ACAAAAGGCA GACCACTCCC ATCAAAAAGA ATCTACCCAG CAGTAAAAGC ACGTAATTTT
GGATTAGCAT TAGCCGGAAT TTCATTAGTA TTAGCATTTG GAATTTCATT TACAACTACT
TTAGAACAAG GTCTATGGGC CACTGCATTC ATAGCATTTG GATTACTGAA CAACATTTTG
GTATACTCGT ATGCACTAAA ACGAAATTCA AGAACTAACA TAATTTTAGG AGGATTATGC
GGAGGTTCAC CACCAATGAT TGGATGGGTT GCAGTTACAA TGTCAGATTT ATGGACAATG
GGACTTGCAA TGGCAGGATT GGTGTTCATT TGGATTCCAA TGCACATTTG GGCATTAACT
TTGCATTTCA AAGATGATTA CAACAAGGTA AATGTTCCAA TGCTAACTGC AGTTCAATCA
GAAAAAACAT CTGCAAGAGC AATCGCAGGA TCAACTGTGG TAATGGTATT ATTTTCAATA
GCACCATTTT TCATAACAAC ACAATCAGGA GAAGAGATGG TAGGAGGAGT GTACTTGTGG
ACTGCAATTG CATCAGGTAT TTTGATGGTA GCACTATCAA TTTGGGTAAT AGTAAAACCC
ATGGAAAAAG CATCGTGGAC TTTGTTTAAA TTTTCTAGTC CATATTTGGC AGTATTATTT
ATTGCATTAA TGGTAGATTC TGCACTATAA
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| Protein sequence | MQKQKTESRV AVYYELTKPK IWYLLVFTAF GAALTASNIY GIEIAPSTWA LMLFSVAAGS
AAANTLTNYH DRDIDAIMER TKGRPLPSKR IYPAVKARNF GLALAGISLV LAFGISFTTT
LEQGLWATAF IAFGLLNNIL VYSYALKRNS RTNIILGGLC GGSPPMIGWV AVTMSDLWTM
GLAMAGLVFI WIPMHIWALT LHFKDDYNKV NVPMLTAVQS EKTSARAIAG STVVMVLFSI
APFFITTQSG EEMVGGVYLW TAIASGILMV ALSIWVIVKP MEKASWTLFK FSSPYLAVLF
IALMVDSAL
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