Gene Nmar_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1586 
Symbol 
ID5773477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand+ 
Start bp1451414 
End bp1452490 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content36% 
IMG OID641317239 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001582920 
Protein GI161529094 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR00978] aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGA AAAGAGTTGC AATTATAGGA GTTACAGGTT CCGTAGGACA GGAATTCGTA 
CAATCTTTGA ATAATCACCC ATGGTTTGAA GTAACTCAAA TCGCAGCTTC AGAACGCTCT 
GCAGGTAAGA ATTATCTTGA TGCCATCAGA AATGAAGGCG GGATCATCAT GTGGGATGTA 
GGAGGCGAGA TCCCAGATTA CATCAAAGAA ATGACTGTAA AAAGCATTGA CGAACTTGAT 
ACATCACAAT TAGACTTGAT ATTTTCAGCA GTTGAATCTC AAGCTGCAAG AGACATTGAA 
ACTAAAATGG CAGCCGAACT ACCAGTAGTT TCAACTAGTT CTGCATATAG ATACGAAGAA 
GATGTTCCAA TTCTCATTCC AGGTGTAAAT GATGAGCAAG TTGAACTAAT AGAAACTCAA 
AAGAAAAATC GCAACTGGAA AGGATTTGTA ACACCATTAC CTAACTGTAC AACTACAGGT 
TTAGCAATTA CATTAAAACC ACTACTTGAA AAATATGGTG CAAAAAAAGT CATGATGACT 
TCAATGCAAG CAATTTCAGG AGGTGGAAAG TCAGGAGTAT CTGCCATGGG AATTACAGAT 
AACATCTTAC CTTACATTCC AAAAGAAGAA GGTAAAGTTA GACTAGAGAC AAGAAAAATT 
TTGGGAAAAC TAGTAGATGG TAAAATAGAG GATGCAGATA TTAGAGTTAG TTGTACTTGT 
ACTAGAGTTC CAGTAATTGA TGGACATACT GAATCAGTTT TTGTTGAAAC TTCAGAAGAC 
ATTGATCCAG CTAAAGCAAA AGAACTCTAC AATGGTTACA ATAAAAATAT CTCAGTTCAA 
GGATTACCAT CAGCTCCTAA AGAATACTAT GCATTCCATG AAGACCCAAC AAGACCTCAA 
CCAAGAATGG AAAGAGAAGT TGGTAACGGA ATGACTACAA CAATTGGCAG AGTTGAAAAA 
GAAGAATTGT TTGATAAAGG TCTCAAATAC ATGTTATTCT CACATAACAA GAAAATGGGT 
TCAGCAAAAG GCGCAGTACT CTTAGCTGAA ATGTTATACA AAAAAGGTAA GATCTAG
 
Protein sequence
MEKKRVAIIG VTGSVGQEFV QSLNNHPWFE VTQIAASERS AGKNYLDAIR NEGGIIMWDV 
GGEIPDYIKE MTVKSIDELD TSQLDLIFSA VESQAARDIE TKMAAELPVV STSSAYRYEE 
DVPILIPGVN DEQVELIETQ KKNRNWKGFV TPLPNCTTTG LAITLKPLLE KYGAKKVMMT 
SMQAISGGGK SGVSAMGITD NILPYIPKEE GKVRLETRKI LGKLVDGKIE DADIRVSCTC 
TRVPVIDGHT ESVFVETSED IDPAKAKELY NGYNKNISVQ GLPSAPKEYY AFHEDPTRPQ 
PRMEREVGNG MTTTIGRVEK EELFDKGLKY MLFSHNKKMG SAKGAVLLAE MLYKKGKI